Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.34■■□□□ 1.65
SHKBP1Q8TBC3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SHKBP1Q8TBC3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
SHKBP1Q8TBC3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
SHKBP1Q8TBC3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SHKBP1Q8TBC3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.33■■□□□ 1.65
SHKBP1Q8TBC3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
SHKBP1Q8TBC3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SHKBP1Q8TBC3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
SHKBP1Q8TBC3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
SHKBP1Q8TBC3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SHKBP1Q8TBC3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
SHKBP1Q8TBC3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
SHKBP1Q8TBC3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHKBP1Q8TBC3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHKBP1Q8TBC3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SHKBP1Q8TBC3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
SHKBP1Q8TBC3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.32■■□□□ 1.64
SHKBP1Q8TBC3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SHKBP1Q8TBC3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SHKBP1Q8TBC3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
SHKBP1Q8TBC3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SHKBP1Q8TBC3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.31■■□□□ 1.64
SHKBP1Q8TBC3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SHKBP1Q8TBC3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.31■■□□□ 1.64
SHKBP1Q8TBC3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SHKBP1Q8TBC3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.3■■□□□ 1.64
SHKBP1Q8TBC3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
SHKBP1Q8TBC3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SHKBP1Q8TBC3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
SHKBP1Q8TBC3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.3■■□□□ 1.64
SHKBP1Q8TBC3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
SHKBP1Q8TBC3 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.3■■□□□ 1.64
SHKBP1Q8TBC3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.3■■□□□ 1.64
SHKBP1Q8TBC3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SHKBP1Q8TBC3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
SHKBP1Q8TBC3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
SHKBP1Q8TBC3 GUSBP5-201ENST00000418136 578 ntBASIC25.29■■□□□ 1.64
SHKBP1Q8TBC3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SHKBP1Q8TBC3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.29■■□□□ 1.64
SHKBP1Q8TBC3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.29■■□□□ 1.64
SHKBP1Q8TBC3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.29■■□□□ 1.64
SHKBP1Q8TBC3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
SHKBP1Q8TBC3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SHKBP1Q8TBC3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SHKBP1Q8TBC3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SHKBP1Q8TBC3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SHKBP1Q8TBC3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SHKBP1Q8TBC3 BX255925.1-201ENST00000566954 1854 ntBASIC25.28■■□□□ 1.64
SHKBP1Q8TBC3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHKBP1Q8TBC3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHKBP1Q8TBC3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHKBP1Q8TBC3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SHKBP1Q8TBC3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHKBP1Q8TBC3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.27■■□□□ 1.64
SHKBP1Q8TBC3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.27■■□□□ 1.64
SHKBP1Q8TBC3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SHKBP1Q8TBC3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SHKBP1Q8TBC3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SHKBP1Q8TBC3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SHKBP1Q8TBC3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SHKBP1Q8TBC3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
SHKBP1Q8TBC3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.26■■□□□ 1.63
SHKBP1Q8TBC3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
SHKBP1Q8TBC3 AC142472.1-201ENST00000612013 1741 ntBASIC25.26■■□□□ 1.63
SHKBP1Q8TBC3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SHKBP1Q8TBC3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SHKBP1Q8TBC3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.25■■□□□ 1.63
SHKBP1Q8TBC3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.25■■□□□ 1.63
SHKBP1Q8TBC3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SHKBP1Q8TBC3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.25■■□□□ 1.63
SHKBP1Q8TBC3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SHKBP1Q8TBC3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SHKBP1Q8TBC3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.24■■□□□ 1.63
SHKBP1Q8TBC3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SHKBP1Q8TBC3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SHKBP1Q8TBC3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.23■■□□□ 1.63
SHKBP1Q8TBC3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
SHKBP1Q8TBC3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
SHKBP1Q8TBC3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SHKBP1Q8TBC3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
SHKBP1Q8TBC3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SHKBP1Q8TBC3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.21■■□□□ 1.63
SHKBP1Q8TBC3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.21■■□□□ 1.63
SHKBP1Q8TBC3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.21■■□□□ 1.63
SHKBP1Q8TBC3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.21■■□□□ 1.63
SHKBP1Q8TBC3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.21■■□□□ 1.63
SHKBP1Q8TBC3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SHKBP1Q8TBC3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
SHKBP1Q8TBC3 KRT18P10-201ENST00000388836 1287 ntBASIC25.2■■□□□ 1.62
SHKBP1Q8TBC3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.2■■□□□ 1.62
SHKBP1Q8TBC3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SHKBP1Q8TBC3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.19■■□□□ 1.62
SHKBP1Q8TBC3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SHKBP1Q8TBC3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
SHKBP1Q8TBC3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
SHKBP1Q8TBC3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.19■■□□□ 1.62
SHKBP1Q8TBC3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SHKBP1Q8TBC3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
SHKBP1Q8TBC3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms