Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01006Q8NI28 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LINC01006Q8NI28 KRT18P24-201ENST00000344739 1156 ntBASIC18.94■□□□□ 0.62
LINC01006Q8NI28 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01006Q8NI28 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LINC01006Q8NI28 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01006Q8NI28 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LINC01006Q8NI28 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.94■□□□□ 0.62
LINC01006Q8NI28 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01006Q8NI28 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LINC01006Q8NI28 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01006Q8NI28 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01006Q8NI28 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01006Q8NI28 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
LINC01006Q8NI28 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.94■□□□□ 0.62
LINC01006Q8NI28 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01006Q8NI28 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.93■□□□□ 0.62
LINC01006Q8NI28 MIR4787-201ENST00000607364 84 ntBASIC18.93■□□□□ 0.62
LINC01006Q8NI28 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01006Q8NI28 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01006Q8NI28 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
LINC01006Q8NI28 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LINC01006Q8NI28 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01006Q8NI28 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.92■□□□□ 0.62
LINC01006Q8NI28 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01006Q8NI28 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01006Q8NI28 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01006Q8NI28 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01006Q8NI28 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01006Q8NI28 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.91■□□□□ 0.62
LINC01006Q8NI28 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01006Q8NI28 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
LINC01006Q8NI28 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.91■□□□□ 0.62
LINC01006Q8NI28 AC142472.1-201ENST00000612013 1741 ntBASIC18.91■□□□□ 0.62
LINC01006Q8NI28 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LINC01006Q8NI28 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LINC01006Q8NI28 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01006Q8NI28 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01006Q8NI28 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01006Q8NI28 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.89■□□□□ 0.62
LINC01006Q8NI28 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01006Q8NI28 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.89■□□□□ 0.61
LINC01006Q8NI28 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01006Q8NI28 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.89■□□□□ 0.61
LINC01006Q8NI28 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.88■□□□□ 0.61
LINC01006Q8NI28 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01006Q8NI28 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01006Q8NI28 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.88■□□□□ 0.61
LINC01006Q8NI28 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.88■□□□□ 0.61
LINC01006Q8NI28 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
LINC01006Q8NI28 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01006Q8NI28 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01006Q8NI28 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01006Q8NI28 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.87■□□□□ 0.61
LINC01006Q8NI28 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.87■□□□□ 0.61
LINC01006Q8NI28 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LINC01006Q8NI28 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01006Q8NI28 AC008406.3-201ENST00000620001 1374 ntBASIC18.87■□□□□ 0.61
LINC01006Q8NI28 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01006Q8NI28 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01006Q8NI28 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01006Q8NI28 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.86■□□□□ 0.61
LINC01006Q8NI28 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01006Q8NI28 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01006Q8NI28 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.86■□□□□ 0.61
LINC01006Q8NI28 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.86■□□□□ 0.61
LINC01006Q8NI28 UNC93B8-201ENST00000511903 705 ntBASIC18.86■□□□□ 0.61
LINC01006Q8NI28 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.86■□□□□ 0.61
LINC01006Q8NI28 AC137630.3-201ENST00000607245 391 ntBASIC18.86■□□□□ 0.61
LINC01006Q8NI28 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01006Q8NI28 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.86■□□□□ 0.61
LINC01006Q8NI28 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01006Q8NI28 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01006Q8NI28 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01006Q8NI28 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01006Q8NI28 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.85■□□□□ 0.61
LINC01006Q8NI28 AC120024.1-201ENST00000562672 995 ntBASIC18.85■□□□□ 0.61
LINC01006Q8NI28 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.85■□□□□ 0.61
LINC01006Q8NI28 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01006Q8NI28 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01006Q8NI28 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.85■□□□□ 0.61
LINC01006Q8NI28 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
LINC01006Q8NI28 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
LINC01006Q8NI28 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.84■□□□□ 0.61
LINC01006Q8NI28 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01006Q8NI28 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.84■□□□□ 0.61
LINC01006Q8NI28 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01006Q8NI28 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.84■□□□□ 0.61
LINC01006Q8NI28 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01006Q8NI28 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01006Q8NI28 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01006Q8NI28 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01006Q8NI28 KRT16P3-201ENST00000439127 1283 ntBASIC18.83■□□□□ 0.6
LINC01006Q8NI28 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.83■□□□□ 0.6
LINC01006Q8NI28 AP004609.3-201ENST00000610705 1884 ntBASIC18.83■□□□□ 0.6
LINC01006Q8NI28 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.83■□□□□ 0.6
LINC01006Q8NI28 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01006Q8NI28 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
LINC01006Q8NI28 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01006Q8NI28 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms