Protein–RNA interactions for Protein: Q6MZP7

LIN54, Protein lin-54 homolog, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54Q6MZP7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LIN54Q6MZP7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LIN54Q6MZP7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
LIN54Q6MZP7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LIN54Q6MZP7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LIN54Q6MZP7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
LIN54Q6MZP7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIN54Q6MZP7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIN54Q6MZP7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIN54Q6MZP7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIN54Q6MZP7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIN54Q6MZP7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.4■□□□□ 0.86
LIN54Q6MZP7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIN54Q6MZP7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LIN54Q6MZP7 WHAMMP2-203ENST00000563942 1603 ntBASIC20.4■□□□□ 0.86
LIN54Q6MZP7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LIN54Q6MZP7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LIN54Q6MZP7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.39■□□□□ 0.86
LIN54Q6MZP7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LIN54Q6MZP7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LIN54Q6MZP7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.39■□□□□ 0.85
LIN54Q6MZP7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
LIN54Q6MZP7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LIN54Q6MZP7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LIN54Q6MZP7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LIN54Q6MZP7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.39■□□□□ 0.85
LIN54Q6MZP7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LIN54Q6MZP7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LIN54Q6MZP7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LIN54Q6MZP7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LIN54Q6MZP7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LIN54Q6MZP7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.38■□□□□ 0.85
LIN54Q6MZP7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LIN54Q6MZP7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
LIN54Q6MZP7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LIN54Q6MZP7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.38■□□□□ 0.85
LIN54Q6MZP7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.38■□□□□ 0.85
LIN54Q6MZP7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.38■□□□□ 0.85
LIN54Q6MZP7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.38■□□□□ 0.85
LIN54Q6MZP7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LIN54Q6MZP7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LIN54Q6MZP7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.37■□□□□ 0.85
LIN54Q6MZP7 AL139125.2-201ENST00000623134 1869 ntBASIC20.37■□□□□ 0.85
LIN54Q6MZP7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LIN54Q6MZP7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LIN54Q6MZP7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LIN54Q6MZP7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LIN54Q6MZP7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LIN54Q6MZP7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.37■□□□□ 0.85
LIN54Q6MZP7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LIN54Q6MZP7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.36■□□□□ 0.85
LIN54Q6MZP7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LIN54Q6MZP7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LIN54Q6MZP7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LIN54Q6MZP7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.36■□□□□ 0.85
LIN54Q6MZP7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LIN54Q6MZP7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LIN54Q6MZP7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIN54Q6MZP7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIN54Q6MZP7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LIN54Q6MZP7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIN54Q6MZP7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIN54Q6MZP7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIN54Q6MZP7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIN54Q6MZP7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIN54Q6MZP7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIN54Q6MZP7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LIN54Q6MZP7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIN54Q6MZP7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIN54Q6MZP7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIN54Q6MZP7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
LIN54Q6MZP7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LIN54Q6MZP7 AC142472.1-201ENST00000612013 1741 ntBASIC20.33■□□□□ 0.85
LIN54Q6MZP7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LIN54Q6MZP7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LIN54Q6MZP7 ABHD17AP4-201ENST00000411545 909 ntBASIC20.33■□□□□ 0.85
LIN54Q6MZP7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LIN54Q6MZP7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LIN54Q6MZP7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LIN54Q6MZP7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
LIN54Q6MZP7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LIN54Q6MZP7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIN54Q6MZP7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.32■□□□□ 0.84
LIN54Q6MZP7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
LIN54Q6MZP7 ZNRF2P2-203ENST00000454624 420 ntBASIC20.32■□□□□ 0.84
LIN54Q6MZP7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIN54Q6MZP7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LIN54Q6MZP7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIN54Q6MZP7 AC138932.3-201ENST00000567634 1902 ntBASIC20.31■□□□□ 0.84
LIN54Q6MZP7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LIN54Q6MZP7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.31■□□□□ 0.84
LIN54Q6MZP7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LIN54Q6MZP7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LIN54Q6MZP7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.31■□□□□ 0.84
LIN54Q6MZP7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LIN54Q6MZP7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LIN54Q6MZP7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.3■□□□□ 0.84
LIN54Q6MZP7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIN54Q6MZP7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIN54Q6MZP7 AC022211.4-201ENST00000625094 2161 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms