Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.035e-7■■■■■ 34.4
DDX59Q5T1V6 SPON2-220ENST00000515004 571 ntTSL 420.03■□□□□ 0.85e-7■■■■■ 34.4
DDX59Q5T1V6 SPON2-212ENST00000509233 549 ntTSL 417.09■□□□□ 0.335e-7■■■■■ 34.4
DDX59Q5T1V6 SPON2-215ENST00000511672 557 ntTSL 415.45■□□□□ 0.065e-7■■■■■ 34.4
DDX59Q5T1V6 SPON2-216ENST00000511679 556 ntTSL 513.78□□□□□ -0.25e-7■■■■■ 34.4
DDX59Q5T1V6 SPON2-210ENST00000506266 462 ntTSL 411.85□□□□□ -0.515e-7■■■■■ 34.4
DDX59Q5T1V6 MRPL42-209ENST00000552326 567 ntTSL 44.35□□□□□ -1.717e-8■■■■■ 34.4
DDX59Q5T1V6 MRPL42-207ENST00000551396 725 ntTSL 54.01□□□□□ -1.777e-8■■■■■ 34.4
DDX59Q5T1V6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.777e-8■■■■■ 34.4
DDX59Q5T1V6 MRPL42-201ENST00000358678 2105 ntTSL 1 (best)3.77□□□□□ -1.817e-8■■■■■ 34.4
DDX59Q5T1V6 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.887e-8■■■■■ 34.4
DDX59Q5T1V6 MRPL42-205ENST00000549561 775 ntTSL 32.83□□□□□ -1.967e-8■■■■■ 34.4
DDX59Q5T1V6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.58□□□□□ -2.167e-8■■■■■ 34.4
DDX59Q5T1V6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.29■■□□□ 1.161e-13■■■■■ 34.4
DDX59Q5T1V6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.08■□□□□ 0.491e-13■■■■■ 34.4
DDX59Q5T1V6 TMEM8B-205ENST00000464519 681 ntTSL 317.14■□□□□ 0.331e-13■■■■■ 34.4
DDX59Q5T1V6 TMEM8B-207ENST00000473947 999 ntTSL 516.94■□□□□ 0.31e-13■■■■■ 34.4
DDX59Q5T1V6 TMEM8B-206ENST00000472010 964 ntTSL 312.98□□□□□ -0.331e-13■■■■■ 34.4
DDX59Q5T1V6 TMEM8B-201ENST00000377988 3731 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.551e-13■■■■■ 34.4
DDX59Q5T1V6 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.331e-13■■■■■ 34.4
DDX59Q5T1V6 KIF13B-204ENST00000523130 1267 ntTSL 518.45■□□□□ 0.546e-11■■■■■ 34.4
DDX59Q5T1V6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.266e-11■■■■■ 34.4
DDX59Q5T1V6 SRCIN1-210ENST00000612208 1316 ntTSL 1 (best)20.03■□□□□ 0.84e-7■■■■■ 34.3
DDX59Q5T1V6 SRCIN1-216ENST00000621763 5225 ntTSL 217.2■□□□□ 0.344e-7■■■■■ 34.3
DDX59Q5T1V6 SRCIN1-218ENST00000622519 5204 ntTSL 215.83■□□□□ 0.124e-7■■■■■ 34.3
DDX59Q5T1V6 SRCIN1-217ENST00000622190 4635 ntTSL 214.93□□□□□ -0.024e-7■■■■■ 34.3
DDX59Q5T1V6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.773e-12■■■■■ 34.3
DDX59Q5T1V6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.713e-12■■■■■ 34.3
DDX59Q5T1V6 GRINA-205ENST00000529301 1075 ntTSL 318.96■□□□□ 0.633e-12■■■■■ 34.3
DDX59Q5T1V6 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.38□□□□□ -0.274e-7■■■■■ 34.3
DDX59Q5T1V6 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.424e-7■■■■■ 34.3
DDX59Q5T1V6 PCGF2-207ENST00000620225 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.554e-7■■■■■ 34.3
DDX59Q5T1V6 PCGF2-205ENST00000618506 1196 ntTSL 5 BASIC10.95□□□□□ -0.664e-7■■■■■ 34.3
DDX59Q5T1V6 KDM5B-205ENST00000467487 529 ntTSL 316.64■□□□□ 0.252e-8■■■■■ 34.3
DDX59Q5T1V6 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.15□□□□□ -0.142e-8■■■■■ 34.3
DDX59Q5T1V6 KDM5B-201ENST00000235790 4418 ntTSL 213.65□□□□□ -0.222e-8■■■■■ 34.3
DDX59Q5T1V6 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.452e-8■■■■■ 34.3
DDX59Q5T1V6 KDM5B-210ENST00000602511 542 ntTSL 57.63□□□□□ -1.192e-8■■■■■ 34.3
DDX59Q5T1V6 KDM5B-206ENST00000470573 535 ntTSL 46.11□□□□□ -1.432e-8■■■■■ 34.3
DDX59Q5T1V6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.031e-6■■■■■ 34.2
DDX59Q5T1V6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.67□□□□□ -0.061e-6■■■■■ 34.2
DDX59Q5T1V6 RPH3AL-212ENST00000573780 531 ntTSL 412.3□□□□□ -0.442e-6■■■■■ 34.2
DDX59Q5T1V6 AP5Z1-202ENST00000469614 2337 ntTSL 217.36■□□□□ 0.373e-7■■■■■ 34.1
DDX59Q5T1V6 AP5Z1-207ENST00000496303 5660 ntTSL 216.56■□□□□ 0.243e-7■■■■■ 34.1
DDX59Q5T1V6 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.23e-7■■■■■ 34.1
DDX59Q5T1V6 AP5Z1-204ENST00000477680 3081 ntTSL 213.32□□□□□ -0.283e-7■■■■■ 34.1
DDX59Q5T1V6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.531e-6■■■■■ 34
DDX59Q5T1V6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.191e-6■■■■■ 34
DDX59Q5T1V6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.141e-6■■■■■ 34
DDX59Q5T1V6 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.21e-6■■■■■ 34
DDX59Q5T1V6 CXXC5-205ENST00000503511 506 ntTSL 215.13■□□□□ 0.012e-7■■■■■ 34
DDX59Q5T1V6 CXXC5-212ENST00000511457 810 ntTSL 314.63□□□□□ -0.072e-7■■■■■ 34
DDX59Q5T1V6 CXXC5-204ENST00000502716 900 ntTSL 214.05□□□□□ -0.162e-7■■■■■ 34
DDX59Q5T1V6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.811e-6■■■■■ 34
DDX59Q5T1V6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.221e-7■■■■■ 34
DDX59Q5T1V6 GRINA-208ENST00000533044 564 ntTSL 38.33□□□□□ -1.081e-11■■■■■ 33.9
DDX59Q5T1V6 HDAC10-212ENST00000477814 1784 ntTSL 219.37■□□□□ 0.691e-8■■■■■ 33.8
DDX59Q5T1V6 MAPK12-209ENST00000497036 6248 ntTSL 218.48■□□□□ 0.551e-8■■■■■ 33.8
DDX59Q5T1V6 HDAC10-204ENST00000429374 1634 ntTSL 1 (best)18.01■□□□□ 0.471e-8■■■■■ 33.8
DDX59Q5T1V6 HDAC10-214ENST00000483222 2091 ntTSL 517.96■□□□□ 0.471e-8■■■■■ 33.8
DDX59Q5T1V6 HDAC10-221ENST00000498366 2153 ntTSL 517.53■□□□□ 0.41e-8■■■■■ 33.8
DDX59Q5T1V6 HDAC10-218ENST00000496909 732 ntTSL 317.13■□□□□ 0.331e-8■■■■■ 33.8
DDX59Q5T1V6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.11■□□□□ 0.331e-8■■■■■ 33.8
DDX59Q5T1V6 HDAC10-207ENST00000470378 1034 ntTSL 317.09■□□□□ 0.331e-8■■■■■ 33.8
DDX59Q5T1V6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.31■□□□□ 0.21e-8■■■■■ 33.8
DDX59Q5T1V6 HDAC10-206ENST00000454936 1922 ntTSL 215.98■□□□□ 0.151e-8■■■■■ 33.8
DDX59Q5T1V6 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.86□□□□□ -0.197e-7■■■■■ 33.8
DDX59Q5T1V6 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.183e-7■■■■■ 33.8
DDX59Q5T1V6 RGS12-210ENST00000506631 1530 ntTSL 1 (best)22.14■■□□□ 1.132e-10■■■■■ 33.8
DDX59Q5T1V6 RGS12-224ENST00000514268 2751 ntTSL 518.22■□□□□ 0.512e-10■■■■■ 33.8
DDX59Q5T1V6 RGS12-222ENST00000513784 710 ntTSL 215.1■□□□□ 0.012e-10■■■■■ 33.8
DDX59Q5T1V6 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.292e-10■■■■■ 33.8
DDX59Q5T1V6 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.43□□□□□ -0.266e-8■■■■■ 33.8
DDX59Q5T1V6 RTEL1-210ENST00000496816 2222 ntTSL 1 (best)18.71■□□□□ 0.591e-6■■■■■ 33.8
DDX59Q5T1V6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.01■□□□□ 0.471e-6■■■■■ 33.8
DDX59Q5T1V6 ZNF341-205ENST00000497876 3140 ntTSL 1 (best)13.56□□□□□ -0.243e-6■■■■■ 33.7
DDX59Q5T1V6 ZNF341-203ENST00000483118 3232 ntTSL 1 (best)13.39□□□□□ -0.273e-6■■■■■ 33.7
DDX59Q5T1V6 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.283e-6■■■■■ 33.7
DDX59Q5T1V6 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.443e-6■■■■■ 33.7
DDX59Q5T1V6 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.48□□□□□ -0.252e-7■■■■■ 33.6
DDX59Q5T1V6 RGS12-207ENST00000504194 3522 ntTSL 1 (best)12.05□□□□□ -0.482e-7■■■■■ 33.6
DDX59Q5T1V6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.99□□□□□ -0.173e-8■■■■■ 33.5
DDX59Q5T1V6 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.212e-15■■■■■ 33.5
DDX59Q5T1V6 TMEM2-211ENST00000543165 542 ntTSL 212.47□□□□□ -0.412e-15■■■■■ 33.5
DDX59Q5T1V6 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.012e-15■■■■■ 33.5
DDX59Q5T1V6 TMEM2-210ENST00000542935 5372 ntTSL 1 (best)7.84□□□□□ -1.152e-15■■■■■ 33.5
DDX59Q5T1V6 TMEM2-212ENST00000545719 533 ntTSL 44.68□□□□□ -1.662e-15■■■■■ 33.5
DDX59Q5T1V6 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.741e-6■■■■■ 33.4
DDX59Q5T1V6 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.751e-6■■■■■ 33.4
DDX59Q5T1V6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.062e-8■■■■■ 33.4
DDX59Q5T1V6 POLD1-202ENST00000593407 867 ntTSL 517.6■□□□□ 0.412e-6■■■■■ 33.3
DDX59Q5T1V6 POLD1-204ENST00000593981 873 ntTSL 517.24■□□□□ 0.352e-6■■■■■ 33.3
DDX59Q5T1V6 POLD1-212ENST00000600859 3474 ntTSL 213.84□□□□□ -0.192e-6■■■■■ 33.3
DDX59Q5T1V6 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.54□□□□□ -0.242e-6■■■■■ 33.3
DDX59Q5T1V6 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.32e-6■■■■■ 33.3
DDX59Q5T1V6 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.96□□□□□ -0.332e-6■■■■■ 33.3
DDX59Q5T1V6 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.352e-6■■■■■ 33.3
DDX59Q5T1V6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.544e-6■■■■■ 33.2
DDX59Q5T1V6 CXXC5-210ENST00000509238 542 ntTSL 215.13■□□□□ 0.013e-7■■■■■ 33.1
DDX59Q5T1V6 PRKCZ-208ENST00000468310 690 ntTSL 519.22■□□□□ 0.671e-6■■■■■ 33
Retrieved 100 of 7,289 protein–RNA pairs in 279.9 ms