RNA–Protein interactions for RNA: ENST00000496909.5

HDAC10-218, Transcript of histone deacetylase 10, humanhuman

TSL 3

Gene HDAC10, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-218ENST00000496909 NISCHQ9Y2I1 1504 aa46.44■■■■■ 5.02
HDAC10-218ENST00000496909 CCDC180Q9P1Z9 1646 aa41.18■■■■■ 4.18
HDAC10-218ENST00000496909 ABCC9O60706 1549 aa40.67■■■■■ 4.1
HDAC10-218ENST00000496909 RB1CC1Q8TDY2 1594 aa38.92■■■■□ 3.82
HDAC10-218ENST00000496909 DCAF8L2P0C7V8 631 aa38.91■■■■□ 3.82
HDAC10-218ENST00000496909 NACADO15069 1562 aa38.88■■■■□ 3.81
HDAC10-218ENST00000496909 MYO15BQ96JP2 1530 aa38.64■■■■□ 3.78
HDAC10-218ENST00000496909 ZCCHC6Q5VYS8 1495 aaKnown RBP38.62■■■■□ 3.77
HDAC10-218ENST00000496909 DCAF1Q9Y4B6 1507 aa38.39■■■■□ 3.74
HDAC10-218ENST00000496909 PABPN1Q86U42 306 aaKnown RBP eCLIP38.08■■■■□ 3.69
HDAC10-218ENST00000496909 UNC13AQ9UPW8 1703 aa37.95■■■■□ 3.67
HDAC10-218ENST00000496909 BICRAQ9NZM4 1560 aa37.87■■■■□ 3.65
HDAC10-218ENST00000496909 DNAJC5BQ9UF47 199 aa37.73■■■■□ 3.63
HDAC10-218ENST00000496909 SCRIBQ14160 1630 aa37.63■■■■□ 3.61
HDAC10-218ENST00000496909 SHROOM4Q9ULL8 1493 aa37.37■■■■□ 3.57
HDAC10-218ENST00000496909 EIF4G1Q04637 1599 aaKnown RBP36.83■■■■□ 3.49
HDAC10-218ENST00000496909 CC2D2AQ9P2K1 1620 aa36.71■■■■□ 3.47
HDAC10-218ENST00000496909 CECR2Q9BXF3 1484 aa36.56■■■■□ 3.44
HDAC10-218ENST00000496909 SMARCA4P51532 1647 aa35.99■■■■□ 3.35
HDAC10-218ENST00000496909 NCAPD3P42695 1498 aa35.99■■■■□ 3.35
HDAC10-218ENST00000496909 ATAD2BQ9ULI0 1458 aa35.96■■■■□ 3.35
HDAC10-218ENST00000496909 BAZ1AQ9NRL2 1556 aaPredicted RBP35.93■■■■□ 3.34
HDAC10-218ENST00000496909 MROH2BQ7Z745 1585 aa35.81■■■■□ 3.32
HDAC10-218ENST00000496909 SMARCA2P51531 1590 aa35.8■■■■□ 3.32
HDAC10-218ENST00000496909 PEG3Q9GZU2 1588 aa35.69■■■■□ 3.3
HDAC10-218ENST00000496909 HMGXB3Q12766 1538 aa35.67■■■■□ 3.3
HDAC10-218ENST00000496909 BAZ1BQ9UIG0 1483 aaKnown RBP35.57■■■■□ 3.28
HDAC10-218ENST00000496909 RSF1Q96T23 1441 aaPredicted RBP35.38■■■■□ 3.25
HDAC10-218ENST00000496909 WIZO95785 1651 aa35.32■■■■□ 3.24
HDAC10-218ENST00000496909 NESP48681 1621 aa35.17■■■■□ 3.22
HDAC10-218ENST00000496909 ERCC6Q03468 1493 aa34.99■■■■□ 3.19
HDAC10-218ENST00000496909 TOP2AP11388 1531 aaKnown RBP34.94■■■■□ 3.18
HDAC10-218ENST00000496909 LAMC3Q9Y6N6 1575 aa34.93■■■■□ 3.18
HDAC10-218ENST00000496909 CADPSQ9ULU8 1353 aa34.93■■■■□ 3.18
HDAC10-218ENST00000496909 PDS5BQ9NTI5 1447 aa34.78■■■■□ 3.16
HDAC10-218ENST00000496909 CUX2O14529 1486 aa34.72■■■■□ 3.15
HDAC10-218ENST00000496909 CFTRP13569 1480 aa34.66■■■■□ 3.14
HDAC10-218ENST00000496909 CCDC88BA6NC98 1476 aa34.63■■■■□ 3.13
HDAC10-218ENST00000496909 KIF21AQ7Z4S6 1674 aa34.57■■■■□ 3.12
HDAC10-218ENST00000496909 THOC2Q8NI27 1593 aaKnown RBP34.56■■■■□ 3.12
HDAC10-218ENST00000496909 FANCD2Q9BXW9 1451 aa34.47■■■■□ 3.11
HDAC10-218ENST00000496909 MRC2Q9UBG0 1479 aa34.41■■■■□ 3.1
HDAC10-218ENST00000496909 CEP164Q9UPV0 1460 aa34.39■■■■□ 3.1
HDAC10-218ENST00000496909 SUPT5HO00267 1087 aaKnown RBP34.3■■■■□ 3.08
HDAC10-218ENST00000496909 WDR62O43379 1518 aa34.29■■■■□ 3.08
HDAC10-218ENST00000496909 URB2Q14146 1524 aaKnown RBP34.17■■■■□ 3.06
HDAC10-218ENST00000496909 PRDM2Q13029 1718 aa34.07■■■■□ 3.04
HDAC10-218ENST00000496909 DNAJC5Q9H3Z4 198 aa34.06■■■■□ 3.04
HDAC10-218ENST00000496909 TOPBP1Q92547 1522 aa33.89■■■■□ 3.02
HDAC10-218ENST00000496909 ABCC8Q09428 1581 aa33.84■■■■□ 3.01
HDAC10-218ENST00000496909 DNMBPQ6XZF7 1577 aa33.77■■■■□ 3
HDAC10-218ENST00000496909 IFT140Q96RY7 1462 aa33.72■■■□□ 2.99
HDAC10-218ENST00000496909 ZNF608Q9ULD9 1512 aaPredicted RBP33.65■■■□□ 2.98
HDAC10-218ENST00000496909 POLA1P09884 1462 aaPredicted RBP33.61■■■□□ 2.97
HDAC10-218ENST00000496909 CUX1P39880 1505 aa33.58■■■□□ 2.97
HDAC10-218ENST00000496909 TARBP1Q13395 1621 aaKnown RBP33.51■■■□□ 2.96
HDAC10-218ENST00000496909 RAD54L2Q9Y4B4 1467 aa33.5■■■□□ 2.95
HDAC10-218ENST00000496909 SOGA1O94964 1423 aa33.49■■■□□ 2.95
HDAC10-218ENST00000496909 FGD5Q6ZNL6 1462 aa33.47■■■□□ 2.95
HDAC10-218ENST00000496909 AQRO60306 1485 aaKnown RBP eCLIP33.44■■■□□ 2.941e-8■■■□□ 18.9
HDAC10-218ENST00000496909 TDRD9Q8NDG6 1382 aaKnown RBP33.37■■■□□ 2.93
HDAC10-218ENST00000496909 EIF4G3O43432 1585 aaKnown RBP33.36■■■□□ 2.93
HDAC10-218ENST00000496909 OSCARQ8IYS5 282 aa33.36■■■□□ 2.93
HDAC10-218ENST00000496909 WRNQ14191 1432 aaPredicted RBP eCLIP33.28■■■□□ 2.92
HDAC10-218ENST00000496909 SYNJ1O43426 1573 aa33.18■■■□□ 2.9
HDAC10-218ENST00000496909 TOP2BQ02880 1626 aa33.17■■■□□ 2.9
HDAC10-218ENST00000496909 ABCA10Q8WWZ4 1543 aa33.16■■■□□ 2.9
HDAC10-218ENST00000496909 WDR97A6NE52 1622 aa33.14■■■□□ 2.9
HDAC10-218ENST00000496909 BIVM-ERCC5R4GMW8 1640 aa33.12■■■□□ 2.89
HDAC10-218ENST00000496909 GRIN2BQ13224 1484 aa33.08■■■□□ 2.89
HDAC10-218ENST00000496909 GAPVD1Q14C86 1478 aa33.06■■■□□ 2.88
HDAC10-218ENST00000496909 SNAPC4Q5SXM2 1469 aa33.05■■■□□ 2.88
HDAC10-218ENST00000496909 FBLN2P98095 1184 aa33.04■■■□□ 2.88
HDAC10-218ENST00000496909 MAGI1Q96QZ7 1491 aaPredicted RBP32.99■■■□□ 2.87
HDAC10-218ENST00000496909 ABCA5Q8WWZ7 1642 aa32.97■■■□□ 2.87
HDAC10-218ENST00000496909 CHMP7Q8WUX9 453 aaPredicted RBP32.94■■■□□ 2.86
HDAC10-218ENST00000496909 CHD1O14646 1710 aa32.91■■■□□ 2.86
HDAC10-218ENST00000496909 SYNJ2O15056 1496 aa32.88■■■□□ 2.85
HDAC10-218ENST00000496909 PBRM1Q86U86 1689 aa32.82■■■□□ 2.84
HDAC10-218ENST00000496909 TRIM41Q8WV44 630 aa32.75■■■□□ 2.83
HDAC10-218ENST00000496909 ARHGEF11O15085 1522 aa32.73■■■□□ 2.83
HDAC10-218ENST00000496909 ERICH3Q5RHP9 1530 aa32.72■■■□□ 2.83
HDAC10-218ENST00000496909 RIMBP3CA6NJZ7 1639 aa32.7■■■□□ 2.83
HDAC10-218ENST00000496909 RIMBP3BA6NNM3 1639 aa32.7■■■□□ 2.83
HDAC10-218ENST00000496909 RIMBP3Q9UFD9 1639 aa32.7■■■□□ 2.83
HDAC10-218ENST00000496909 FHAD1B1AJZ9 1412 aa32.69■■■□□ 2.82
HDAC10-218ENST00000496909 CLASP1Q7Z460 1538 aa32.69■■■□□ 2.82
HDAC10-218ENST00000496909 GRIN2AQ12879 1464 aa32.65■■■□□ 2.82
HDAC10-218ENST00000496909 ADAMTS12P58397 1594 aa32.65■■■□□ 2.82
HDAC10-218ENST00000496909 IGF1RP08069 1367 aa32.61■■■□□ 2.81
HDAC10-218ENST00000496909 KIF27Q86VH2 1401 aa32.59■■■□□ 2.81
HDAC10-218ENST00000496909 NUP160Q12769 1436 aa32.56■■■□□ 2.8
HDAC10-218ENST00000496909 CYB5RLQ6IPT4 315 aa32.53■■■□□ 2.8
HDAC10-218ENST00000496909 ARAP1Q96P48 1450 aa32.49■■■□□ 2.79
HDAC10-218ENST00000496909 CEP170Q5SW79 1584 aa32.48■■■□□ 2.79
HDAC10-218ENST00000496909 CARMIL1Q5VZK9 1371 aa32.34■■■□□ 2.77
HDAC10-218ENST00000496909 RUSC2Q8N2Y8 1516 aa32.32■■■□□ 2.76
HDAC10-218ENST00000496909 JPH4Q96JJ6 628 aa32.29■■■□□ 2.76
HDAC10-218ENST00000496909 CUL7Q14999 1698 aa32.27■■■□□ 2.76
HDAC10-218ENST00000496909 ERCC6L2Q5T890 1561 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms