RNA–Protein interactions for RNA: ENST00000483222.5

HDAC10-214, Transcript of histone deacetylase 10, humanhuman

TSL 5

Gene HDAC10, Length 2,091 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-214ENST00000483222 NISCHQ9Y2I1 1504 aa38.61■■■■□ 3.77
HDAC10-214ENST00000483222 CCDC180Q9P1Z9 1646 aa33.12■■■□□ 2.89
HDAC10-214ENST00000483222 ZCCHC6Q5VYS8 1495 aaKnown RBP32.72■■■□□ 2.83
HDAC10-214ENST00000483222 SHROOM4Q9ULL8 1493 aa32.32■■■□□ 2.76
HDAC10-214ENST00000483222 ABCC9O60706 1549 aa32.05■■■□□ 2.72
HDAC10-214ENST00000483222 DCAF1Q9Y4B6 1507 aa32.04■■■□□ 2.72
HDAC10-214ENST00000483222 SUPT5HO00267 1087 aaKnown RBP31.85■■■□□ 2.69
HDAC10-214ENST00000483222 DCAF8L2P0C7V8 631 aa31.55■■■□□ 2.64
HDAC10-214ENST00000483222 CHIC1Q5VXU3 224 aa31.25■■■□□ 2.59
HDAC10-214ENST00000483222 MYO15BQ96JP2 1530 aa31.17■■■□□ 2.58
HDAC10-214ENST00000483222 NACADO15069 1562 aa30.9■■■□□ 2.54
HDAC10-214ENST00000483222 RB1CC1Q8TDY2 1594 aa30.83■■■□□ 2.53
HDAC10-214ENST00000483222 HRCP23327 699 aa30.56■■■□□ 2.48
HDAC10-214ENST00000483222 SCRIBQ14160 1630 aa30.51■■■□□ 2.48
HDAC10-214ENST00000483222 RSF1Q96T23 1441 aaPredicted RBP30.45■■■□□ 2.47
HDAC10-214ENST00000483222 UNC13AQ9UPW8 1703 aa30.22■■■□□ 2.43
HDAC10-214ENST00000483222 PCGF6Q9BYE7 350 aa30.22■■■□□ 2.43
HDAC10-214ENST00000483222 PABPN1Q86U42 306 aaKnown RBP eCLIP30.19■■■□□ 2.428e-8■■□□□ 13.3
HDAC10-214ENST00000483222 LOC105371045A0A1W2PR82 267 aa30.02■■■□□ 2.4
HDAC10-214ENST00000483222 TRIM26Q12899 539 aaPredicted RBP30■■■□□ 2.39
HDAC10-214ENST00000483222 BICRAQ9NZM4 1560 aa29.98■■■□□ 2.39
HDAC10-214ENST00000483222 TRIM41Q8WV44 630 aa29.95■■■□□ 2.39
HDAC10-214ENST00000483222 MROH2BQ7Z745 1585 aa29.82■■■□□ 2.36
HDAC10-214ENST00000483222 BAZ1AQ9NRL2 1556 aaPredicted RBP29.78■■■□□ 2.36
HDAC10-214ENST00000483222 CECR2Q9BXF3 1484 aa29.78■■■□□ 2.36
HDAC10-214ENST00000483222 ZEB1P37275 1124 aaPredicted RBP29.7■■■□□ 2.35
HDAC10-214ENST00000483222 WIZO95785 1651 aa29.65■■■□□ 2.34
HDAC10-214ENST00000483222 EIF4G1Q04637 1599 aaKnown RBP29.5■■■□□ 2.31
HDAC10-214ENST00000483222 TOP2AP11388 1531 aaKnown RBP29.48■■■□□ 2.31
HDAC10-214ENST00000483222 SMARCA4P51532 1647 aa29.4■■■□□ 2.3
HDAC10-214ENST00000483222 PPARGC1BQ86YN6 1023 aaKnown RBP29.36■■■□□ 2.29
HDAC10-214ENST00000483222 FAM9AQ8IZU1 332 aaPredicted RBP29.3■■■□□ 2.28
HDAC10-214ENST00000483222 SMARCA2P51531 1590 aa29.19■■■□□ 2.26
HDAC10-214ENST00000483222 EEA1Q15075 1411 aa29.15■■■□□ 2.26
HDAC10-214ENST00000483222 CCDC88BA6NC98 1476 aa29.14■■■□□ 2.26
HDAC10-214ENST00000483222 DNAJC5BQ9UF47 199 aa29.05■■■□□ 2.24
HDAC10-214ENST00000483222 PEG3Q9GZU2 1588 aa29.03■■■□□ 2.24
HDAC10-214ENST00000483222 WRNQ14191 1432 aaPredicted RBP eCLIP29.02■■■□□ 2.24
HDAC10-214ENST00000483222 ABCC8Q09428 1581 aa28.91■■■□□ 2.22
HDAC10-214ENST00000483222 CC2D2AQ9P2K1 1620 aa28.9■■■□□ 2.22
HDAC10-214ENST00000483222 TNIKQ9UKE5 1360 aa28.89■■■□□ 2.21
HDAC10-214ENST00000483222 CEP162Q5TB80 1403 aa28.78■■■□□ 2.2
HDAC10-214ENST00000483222 ATAD2BQ9ULI0 1458 aa28.75■■■□□ 2.19
HDAC10-214ENST00000483222 EHMT2Q96KQ7 1210 aa28.74■■■□□ 2.19
HDAC10-214ENST00000483222 CSRNP3Q8WYN3 585 aa28.71■■■□□ 2.19
HDAC10-214ENST00000483222 GOLGA3Q08378 1498 aa28.71■■■□□ 2.19
HDAC10-214ENST00000483222 SOGA1O94964 1423 aa28.66■■■□□ 2.18
HDAC10-214ENST00000483222 KIF21BO75037 1637 aa28.6■■■□□ 2.17
HDAC10-214ENST00000483222 NCAPD3P42695 1498 aa28.58■■■□□ 2.17
HDAC10-214ENST00000483222 CEP164Q9UPV0 1460 aa28.58■■■□□ 2.16
HDAC10-214ENST00000483222 CCER1Q8TC90 406 aaPredicted RBP28.55■■■□□ 2.16
HDAC10-214ENST00000483222 BAZ1BQ9UIG0 1483 aaKnown RBP28.54■■■□□ 2.16
HDAC10-214ENST00000483222 UBTFP17480 764 aaKnown RBP28.46■■■□□ 2.15
HDAC10-214ENST00000483222 SYNJ1O43426 1573 aa28.43■■■□□ 2.14
HDAC10-214ENST00000483222 HMGXB3Q12766 1538 aa28.41■■■□□ 2.14
HDAC10-214ENST00000483222 RUSC2Q8N2Y8 1516 aa28.41■■■□□ 2.14
HDAC10-214ENST00000483222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.37■■■□□ 2.13
HDAC10-214ENST00000483222 TOP2BQ02880 1626 aa28.3■■■□□ 2.12
HDAC10-214ENST00000483222 PELP1Q8IZL8 1130 aaKnown RBP28.27■■■□□ 2.12
HDAC10-214ENST00000483222 CLIP1P30622 1438 aa28.26■■■□□ 2.11
HDAC10-214ENST00000483222 BIVM-ERCC5R4GMW8 1640 aa28.25■■■□□ 2.11
HDAC10-214ENST00000483222 VPS8Q8N3P4 1428 aa28.24■■■□□ 2.11
HDAC10-214ENST00000483222 ERICH3Q5RHP9 1530 aa28.18■■■□□ 2.1
HDAC10-214ENST00000483222 APLP2Q06481 763 aa28.11■■■□□ 2.09
HDAC10-214ENST00000483222 DIEXFQ68CQ4 756 aaKnown RBP28.07■■■□□ 2.08
HDAC10-214ENST00000483222 RAPGEF2Q9Y4G8 1499 aa28.05■■■□□ 2.08
HDAC10-214ENST00000483222 CENPBP07199 599 aaPredicted RBP28.03■■■□□ 2.08
HDAC10-214ENST00000483222 PRXQ9BXM0 1461 aa27.99■■■□□ 2.07
HDAC10-214ENST00000483222 SCAF1Q9H7N4 1312 aaKnown RBP27.97■■■□□ 2.07
HDAC10-214ENST00000483222 ZNF316A6NFI3 1004 aaPredicted RBP27.95■■■□□ 2.06
HDAC10-214ENST00000483222 TTBK1Q5TCY1 1321 aaPredicted RBP27.94■■■□□ 2.06
HDAC10-214ENST00000483222 ACIN1Q9UKV3 1341 aaKnown RBP27.94■■■□□ 2.06
HDAC10-214ENST00000483222 NESP48681 1621 aa27.93■■■□□ 2.06
HDAC10-214ENST00000483222 CLSPNQ9HAW4 1339 aa27.9■■■□□ 2.06
HDAC10-214ENST00000483222 PRDM2Q13029 1718 aa27.89■■■□□ 2.06
HDAC10-214ENST00000483222 KIF27Q86VH2 1401 aa27.88■■■□□ 2.05
HDAC10-214ENST00000483222 CFTRP13569 1480 aa27.86■■■□□ 2.05
HDAC10-214ENST00000483222 CADPSQ9ULU8 1353 aa27.85■■■□□ 2.05
HDAC10-214ENST00000483222 CUX1P39880 1505 aa27.8■■■□□ 2.04
HDAC10-214ENST00000483222 ARAP1Q96P48 1450 aa27.74■■■□□ 2.03
HDAC10-214ENST00000483222 HNRNPUL2Q1KMD3 747 aaKnown RBP27.72■■■□□ 2.03
HDAC10-214ENST00000483222 LAMC3Q9Y6N6 1575 aa27.69■■■□□ 2.02
HDAC10-214ENST00000483222 NEUROD1Q13562 356 aa27.66■■■□□ 2.02
HDAC10-214ENST00000483222 RRBP1Q9P2E9 1410 aaKnown RBP27.63■■■□□ 2.01
HDAC10-214ENST00000483222 MAP3K1Q13233 1512 aa27.6■■■□□ 2.01
HDAC10-214ENST00000483222 CUX2O14529 1486 aa27.58■■■□□ 2.01
HDAC10-214ENST00000483222 PDS5BQ9NTI5 1447 aa27.55■■■□□ 2
HDAC10-214ENST00000483222 FANCD2Q9BXW9 1451 aa27.55■■■□□ 2
HDAC10-214ENST00000483222 ERCC6Q03468 1493 aa27.5■■□□□ 1.99
HDAC10-214ENST00000483222 ARHGAP35Q9NRY4 1499 aa27.49■■□□□ 1.99
HDAC10-214ENST00000483222 KIF21AQ7Z4S6 1674 aa27.48■■□□□ 1.99
HDAC10-214ENST00000483222 DHX57Q6P158 1386 aaKnown RBP27.47■■□□□ 1.99
HDAC10-214ENST00000483222 GTF3C3Q9Y5Q9 886 aa27.45■■□□□ 1.98
HDAC10-214ENST00000483222 CCNB3Q8WWL7 1395 aa27.42■■□□□ 1.98
HDAC10-214ENST00000483222 RANGAP1P46060 587 aaPredicted RBP27.42■■□□□ 1.98
HDAC10-214ENST00000483222 IGF1RP08069 1367 aa27.39■■□□□ 1.98
HDAC10-214ENST00000483222 FHAD1B1AJZ9 1412 aa27.36■■□□□ 1.97
HDAC10-214ENST00000483222 TIAM1Q13009 1591 aa27.35■■□□□ 1.97
HDAC10-214ENST00000483222 KANK4Q5T7N3 995 aaPredicted RBP27.35■■□□□ 1.97
HDAC10-214ENST00000483222 CARMIL1Q5VZK9 1371 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms