RNA–Protein interactions for RNA: ENST00000600859.5

POLD1-212, Transcript of DNA polymerase delta 1, catalytic subunit, humanhuman

TSL 2

Gene POLD1, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLD1-212ENST00000600859 NISCHQ9Y2I1 1504 aa27.04■■□□□ 1.92
POLD1-212ENST00000600859 SHROOM4Q9ULL8 1493 aa24.07■■□□□ 1.44
POLD1-212ENST00000600859 SUPT5HO00267 1087 aaKnown RBP23.89■■□□□ 1.42
POLD1-212ENST00000600859 DCAF8L2P0C7V8 631 aa23.87■■□□□ 1.41
POLD1-212ENST00000600859 HRCP23327 699 aa23.59■■□□□ 1.37
POLD1-212ENST00000600859 PCGF6Q9BYE7 350 aa23.38■■□□□ 1.33
POLD1-212ENST00000600859 MYO15BQ96JP2 1530 aa23.32■■□□□ 1.32
POLD1-212ENST00000600859 CHIC1Q5VXU3 224 aa23.27■■□□□ 1.32
POLD1-212ENST00000600859 PPARGC1BQ86YN6 1023 aaKnown RBP23.26■■□□□ 1.31
POLD1-212ENST00000600859 ZCCHC6Q5VYS8 1495 aaKnown RBP22.95■■□□□ 1.26
POLD1-212ENST00000600859 LOC105371045A0A1W2PR82 267 aa22.81■■□□□ 1.24
POLD1-212ENST00000600859 DCAF1Q9Y4B6 1507 aa22.66■■□□□ 1.22
POLD1-212ENST00000600859 TRIM26Q12899 539 aaPredicted RBP22.57■■□□□ 1.2
POLD1-212ENST00000600859 CCDC180Q9P1Z9 1646 aa22.44■■□□□ 1.18
POLD1-212ENST00000600859 PELP1Q8IZL8 1130 aaKnown RBP22.29■■□□□ 1.16
POLD1-212ENST00000600859 ZEB1P37275 1124 aaPredicted RBP22.26■■□□□ 1.15
POLD1-212ENST00000600859 SCAF1Q9H7N4 1312 aaKnown RBP22.21■■□□□ 1.15
POLD1-212ENST00000600859 ABCC9O60706 1549 aa22.16■■□□□ 1.14
POLD1-212ENST00000600859 FAM9AQ8IZU1 332 aaPredicted RBP22.15■■□□□ 1.14
POLD1-212ENST00000600859 EHMT2Q96KQ7 1210 aa22.15■■□□□ 1.14
POLD1-212ENST00000600859 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
POLD1-212ENST00000600859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.76■■□□□ 1.07
POLD1-212ENST00000600859 RSF1Q96T23 1441 aaPredicted RBP21.75■■□□□ 1.07
POLD1-212ENST00000600859 ACIN1Q9UKV3 1341 aaKnown RBP21.73■■□□□ 1.07
POLD1-212ENST00000600859 NEUROD1Q13562 356 aa21.73■■□□□ 1.07
POLD1-212ENST00000600859 CCER1Q8TC90 406 aaPredicted RBP21.71■■□□□ 1.07
POLD1-212ENST00000600859 RB1CC1Q8TDY2 1594 aa21.63■■□□□ 1.05
POLD1-212ENST00000600859 GTF3C3Q9Y5Q9 886 aa21.61■■□□□ 1.05
POLD1-212ENST00000600859 PABPN1Q86U42 306 aaKnown RBP eCLIP21.59■■□□□ 1.053e-6■■■■□ 23.3
POLD1-212ENST00000600859 SCRIBQ14160 1630 aa21.57■■□□□ 1.04
POLD1-212ENST00000600859 TTBK1Q5TCY1 1321 aaPredicted RBP21.56■■□□□ 1.04
POLD1-212ENST00000600859 DIEXFQ68CQ4 756 aaKnown RBP21.55■■□□□ 1.04
POLD1-212ENST00000600859 CENPBP07199 599 aaPredicted RBP21.54■■□□□ 1.04
POLD1-212ENST00000600859 YTHDC1Q96MU7 727 aaKnown RBP21.32■■□□□ 1
POLD1-212ENST00000600859 MYT1Q01538 1121 aa21.3■■□□□ 1
POLD1-212ENST00000600859 CECR2Q9BXF3 1484 aa21.26■□□□□ 0.99
POLD1-212ENST00000600859 MROH2BQ7Z745 1585 aa21.17■□□□□ 0.98
POLD1-212ENST00000600859 ZNF316A6NFI3 1004 aaPredicted RBP21.16■□□□□ 0.98
POLD1-212ENST00000600859 WIZO95785 1651 aa21.07■□□□□ 0.96
POLD1-212ENST00000600859 CEP162Q5TB80 1403 aa21.04■□□□□ 0.96
POLD1-212ENST00000600859 MIER1Q8N108 512 aa21.03■□□□□ 0.96
POLD1-212ENST00000600859 UBTFP17480 764 aaKnown RBP21.01■□□□□ 0.95
POLD1-212ENST00000600859 WRNQ14191 1432 aaPredicted RBP eCLIP20.98■□□□□ 0.95
POLD1-212ENST00000600859 HNRNPUL2Q1KMD3 747 aaKnown RBP20.97■□□□□ 0.95
POLD1-212ENST00000600859 CCDC88BA6NC98 1476 aa20.95■□□□□ 0.94
POLD1-212ENST00000600859 ABCC8Q09428 1581 aa20.94■□□□□ 0.94
POLD1-212ENST00000600859 SOGA1O94964 1423 aa20.9■□□□□ 0.94
POLD1-212ENST00000600859 TNIKQ9UKE5 1360 aa20.86■□□□□ 0.93
POLD1-212ENST00000600859 CSRNP3Q8WYN3 585 aa20.84■□□□□ 0.93
POLD1-212ENST00000600859 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
POLD1-212ENST00000600859 EIF4G1Q04637 1599 aaKnown RBP20.83■□□□□ 0.93
POLD1-212ENST00000600859 RUSC2Q8N2Y8 1516 aa20.77■□□□□ 0.92
POLD1-212ENST00000600859 NACADO15069 1562 aa20.74■□□□□ 0.91
POLD1-212ENST00000600859 RANGAP1P46060 587 aaPredicted RBP20.69■□□□□ 0.9
POLD1-212ENST00000600859 GOLGA3Q08378 1498 aa20.65■□□□□ 0.9
POLD1-212ENST00000600859 APLP2Q06481 763 aa20.64■□□□□ 0.89
POLD1-212ENST00000600859 EEA1Q15075 1411 aa20.62■□□□□ 0.89
POLD1-212ENST00000600859 TOP2AP11388 1531 aaKnown RBP20.62■□□□□ 0.89
POLD1-212ENST00000600859 SUPT16HQ9Y5B9 1047 aaKnown RBP20.58■□□□□ 0.89
POLD1-212ENST00000600859 SMARCA2P51531 1590 aa20.57■□□□□ 0.88
POLD1-212ENST00000600859 CLIP1P30622 1438 aa20.53■□□□□ 0.88
POLD1-212ENST00000600859 SMARCA4P51532 1647 aa20.45■□□□□ 0.86
POLD1-212ENST00000600859 CEP164Q9UPV0 1460 aa20.44■□□□□ 0.86
POLD1-212ENST00000600859 VPS8Q8N3P4 1428 aa20.44■□□□□ 0.86
POLD1-212ENST00000600859 TSHZ2Q9NRE2 1034 aa20.42■□□□□ 0.86
POLD1-212ENST00000600859 CLSPNQ9HAW4 1339 aa20.41■□□□□ 0.86
POLD1-212ENST00000600859 BCANQ96GW7 911 aa20.36■□□□□ 0.85
POLD1-212ENST00000600859 DHX57Q6P158 1386 aaKnown RBP20.35■□□□□ 0.85
POLD1-212ENST00000600859 ANP32EQ9BTT0 268 aa20.32■□□□□ 0.84
POLD1-212ENST00000600859 RAPGEF2Q9Y4G8 1499 aa20.31■□□□□ 0.84
POLD1-212ENST00000600859 KCNH8Q96L42 1107 aa20.29■□□□□ 0.84
POLD1-212ENST00000600859 KIF21BO75037 1637 aa20.28■□□□□ 0.84
POLD1-212ENST00000600859 ITGAEP38570 1179 aa20.26■□□□□ 0.83
POLD1-212ENST00000600859 SYNJ1O43426 1573 aa20.26■□□□□ 0.83
POLD1-212ENST00000600859 KANK4Q5T7N3 995 aaPredicted RBP20.23■□□□□ 0.83
POLD1-212ENST00000600859 BAZ1BQ9UIG0 1483 aaKnown RBP20.18■□□□□ 0.82
POLD1-212ENST00000600859 FKBP8Q14318 412 aa20.18■□□□□ 0.82
POLD1-212ENST00000600859 BCL11AQ9H165 835 aa20.12■□□□□ 0.81
POLD1-212ENST00000600859 DDX10Q13206 875 aaKnown RBP20.08■□□□□ 0.81
POLD1-212ENST00000600859 ARAP1Q96P48 1450 aa20.03■□□□□ 0.8
POLD1-212ENST00000600859 NEFLP07196 543 aa20.03■□□□□ 0.8
POLD1-212ENST00000600859 DNAJC5BQ9UF47 199 aa20.02■□□□□ 0.8
POLD1-212ENST00000600859 CCNB3Q8WWL7 1395 aa20.01■□□□□ 0.79
POLD1-212ENST00000600859 TRIM52Q96A61 297 aa19.99■□□□□ 0.79
POLD1-212ENST00000600859 UNC13AQ9UPW8 1703 aa19.99■□□□□ 0.79
POLD1-212ENST00000600859 HIRIP3Q9BW71 556 aaPredicted RBP19.99■□□□□ 0.79
POLD1-212ENST00000600859 RRBP1Q9P2E9 1410 aaKnown RBP19.98■□□□□ 0.79
POLD1-212ENST00000600859 RBM19Q9Y4C8 960 aaKnown RBP19.97■□□□□ 0.79
POLD1-212ENST00000600859 RAB3GAP2Q9H2M9 1393 aa19.95■□□□□ 0.78
POLD1-212ENST00000600859 SIN3AQ96ST3 1273 aa19.95■□□□□ 0.78
POLD1-212ENST00000600859 PRXQ9BXM0 1461 aa19.88■□□□□ 0.77
POLD1-212ENST00000600859 CUX2O14529 1486 aa19.87■□□□□ 0.77
POLD1-212ENST00000600859 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
POLD1-212ENST00000600859 FAM50AQ14320 339 aaKnown RBP19.86■□□□□ 0.77
POLD1-212ENST00000600859 MAPKBP1O60336 1514 aa19.84■□□□□ 0.77
POLD1-212ENST00000600859 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
POLD1-212ENST00000600859 ANP32CO43423 234 aa19.84■□□□□ 0.77
POLD1-212ENST00000600859 ERICH3Q5RHP9 1530 aa19.84■□□□□ 0.77
POLD1-212ENST00000600859 PEG3Q9GZU2 1588 aa19.84■□□□□ 0.77
POLD1-212ENST00000600859 WDR97A6NE52 1622 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 1190.8 ms