RNA–Protein interactions for RNA: ENST00000533044.5

GRINA-208, Transcript of glutamate ionotropic receptor NMDA type subunit associated protein 1, humanhuman

TSL 3

Gene GRINA, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRINA-208ENST00000533044 NISCHQ9Y2I1 1504 aa23.28■■□□□ 1.32
GRINA-208ENST00000533044 CCDC180Q9P1Z9 1646 aa20.86■□□□□ 0.93
GRINA-208ENST00000533044 ABCC9O60706 1549 aa20.81■□□□□ 0.92
GRINA-208ENST00000533044 RB1CC1Q8TDY2 1594 aa19.8■□□□□ 0.76
GRINA-208ENST00000533044 DNAJC5BQ9UF47 199 aa19.74■□□□□ 0.75
GRINA-208ENST00000533044 NACADO15069 1562 aa19.73■□□□□ 0.75
GRINA-208ENST00000533044 MYO15BQ96JP2 1530 aa19.58■□□□□ 0.73
GRINA-208ENST00000533044 DCAF8L2P0C7V8 631 aa19.58■□□□□ 0.72
GRINA-208ENST00000533044 PABPN1Q86U42 306 aaKnown RBP eCLIP19.45■□□□□ 0.7
GRINA-208ENST00000533044 DCAF1Q9Y4B6 1507 aa19.34■□□□□ 0.69
GRINA-208ENST00000533044 ZCCHC6Q5VYS8 1495 aaKnown RBP19.32■□□□□ 0.68
GRINA-208ENST00000533044 UNC13AQ9UPW8 1703 aa19.2■□□□□ 0.66
GRINA-208ENST00000533044 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
GRINA-208ENST00000533044 SHROOM4Q9ULL8 1493 aa19.11■□□□□ 0.65
GRINA-208ENST00000533044 SCRIBQ14160 1630 aa18.88■□□□□ 0.61
GRINA-208ENST00000533044 CECR2Q9BXF3 1484 aa18.74■□□□□ 0.59
GRINA-208ENST00000533044 CC2D2AQ9P2K1 1620 aa18.74■□□□□ 0.59
GRINA-208ENST00000533044 EIF4G1Q04637 1599 aaKnown RBP18.7■□□□□ 0.58
GRINA-208ENST00000533044 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
GRINA-208ENST00000533044 DNAJC5Q9H3Z4 198 aa18.14■□□□□ 0.49
GRINA-208ENST00000533044 ATAD2BQ9ULI0 1458 aa18.13■□□□□ 0.49
GRINA-208ENST00000533044 SMARCA2P51531 1590 aa18.12■□□□□ 0.49
GRINA-208ENST00000533044 SMARCA4P51532 1647 aa18.1■□□□□ 0.49
GRINA-208ENST00000533044 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.49
GRINA-208ENST00000533044 HMGXB3Q12766 1538 aa18.08■□□□□ 0.49
GRINA-208ENST00000533044 PEG3Q9GZU2 1588 aa18.01■□□□□ 0.47
GRINA-208ENST00000533044 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
GRINA-208ENST00000533044 ERCC6Q03468 1493 aa17.94■□□□□ 0.46
GRINA-208ENST00000533044 CUX2O14529 1486 aa17.91■□□□□ 0.46
GRINA-208ENST00000533044 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
GRINA-208ENST00000533044 NESP48681 1621 aa17.86■□□□□ 0.45
GRINA-208ENST00000533044 LAMC3Q9Y6N6 1575 aa17.76■□□□□ 0.43
GRINA-208ENST00000533044 PDS5BQ9NTI5 1447 aa17.69■□□□□ 0.42
GRINA-208ENST00000533044 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
GRINA-208ENST00000533044 WIZO95785 1651 aa17.61■□□□□ 0.41
GRINA-208ENST00000533044 THOC2Q8NI27 1593 aaKnown RBP17.6■□□□□ 0.41
GRINA-208ENST00000533044 RSF1Q96T23 1441 aaPredicted RBP17.59■□□□□ 0.41
GRINA-208ENST00000533044 KIF21AQ7Z4S6 1674 aa17.51■□□□□ 0.39
GRINA-208ENST00000533044 TOP2AP11388 1531 aaKnown RBP17.51■□□□□ 0.39
GRINA-208ENST00000533044 MRC2Q9UBG0 1479 aa17.48■□□□□ 0.39
GRINA-208ENST00000533044 CFTRP13569 1480 aa17.47■□□□□ 0.39
GRINA-208ENST00000533044 WDR62O43379 1518 aa17.43■□□□□ 0.38
GRINA-208ENST00000533044 CEP164Q9UPV0 1460 aa17.43■□□□□ 0.38
GRINA-208ENST00000533044 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
GRINA-208ENST00000533044 TRIM41Q8WV44 630 aa17.32■□□□□ 0.36
GRINA-208ENST00000533044 CCDC88BA6NC98 1476 aa17.28■□□□□ 0.36
GRINA-208ENST00000533044 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
GRINA-208ENST00000533044 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
GRINA-208ENST00000533044 OSCARQ8IYS5 282 aa17.18■□□□□ 0.34
GRINA-208ENST00000533044 ABCC8Q09428 1581 aa17.16■□□□□ 0.34
GRINA-208ENST00000533044 IFT140Q96RY7 1462 aa17.11■□□□□ 0.33
GRINA-208ENST00000533044 TOPBP1Q92547 1522 aa17.08■□□□□ 0.32
GRINA-208ENST00000533044 DNMBPQ6XZF7 1577 aa17.04■□□□□ 0.32
GRINA-208ENST00000533044 ZNF608Q9ULD9 1512 aaPredicted RBP17.03■□□□□ 0.32
GRINA-208ENST00000533044 POLA1P09884 1462 aaPredicted RBP16.92■□□□□ 0.3
GRINA-208ENST00000533044 TARBP1Q13395 1621 aaKnown RBP16.91■□□□□ 0.3
GRINA-208ENST00000533044 EIF4G3O43432 1585 aaKnown RBP16.89■□□□□ 0.3
GRINA-208ENST00000533044 AQRO60306 1485 aaKnown RBP eCLIP16.88■□□□□ 0.29
GRINA-208ENST00000533044 WDR97A6NE52 1622 aa16.87■□□□□ 0.29
GRINA-208ENST00000533044 RIMBP3CA6NJZ7 1639 aa16.86■□□□□ 0.29
GRINA-208ENST00000533044 RIMBP3BA6NNM3 1639 aa16.86■□□□□ 0.29
GRINA-208ENST00000533044 RIMBP3Q9UFD9 1639 aa16.86■□□□□ 0.29
GRINA-208ENST00000533044 SOGA1O94964 1423 aa16.85■□□□□ 0.29
GRINA-208ENST00000533044 ARHGEF11O15085 1522 aa16.83■□□□□ 0.28
GRINA-208ENST00000533044 CYB5RLQ6IPT4 315 aa16.82■□□□□ 0.28
GRINA-208ENST00000533044 FBLN2P98095 1184 aa16.81■□□□□ 0.28
GRINA-208ENST00000533044 FGD5Q6ZNL6 1462 aa16.8■□□□□ 0.28
GRINA-208ENST00000533044 RAD54L2Q9Y4B4 1467 aa16.8■□□□□ 0.28
GRINA-208ENST00000533044 SUPT5HO00267 1087 aaKnown RBP16.79■□□□□ 0.28
GRINA-208ENST00000533044 CUX1P39880 1505 aa16.79■□□□□ 0.28
GRINA-208ENST00000533044 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.28
GRINA-208ENST00000533044 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
GRINA-208ENST00000533044 GRIN2BQ13224 1484 aa16.72■□□□□ 0.27
GRINA-208ENST00000533044 CHD1O14646 1710 aa16.69■□□□□ 0.26
GRINA-208ENST00000533044 SNAPC4Q5SXM2 1469 aa16.68■□□□□ 0.26
GRINA-208ENST00000533044 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
GRINA-208ENST00000533044 ABCA10Q8WWZ4 1543 aa16.68■□□□□ 0.26
GRINA-208ENST00000533044 CHMP7Q8WUX9 453 aaPredicted RBP16.66■□□□□ 0.26
GRINA-208ENST00000533044 SYNJ2O15056 1496 aa16.66■□□□□ 0.26
GRINA-208ENST00000533044 GAPVD1Q14C86 1478 aa16.65■□□□□ 0.26
GRINA-208ENST00000533044 WRNQ14191 1432 aaPredicted RBP eCLIP16.64■□□□□ 0.25
GRINA-208ENST00000533044 TRHP20396 242 aaPredicted RBP16.63■□□□□ 0.25
GRINA-208ENST00000533044 SYNJ1O43426 1573 aa16.62■□□□□ 0.25
GRINA-208ENST00000533044 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
GRINA-208ENST00000533044 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
GRINA-208ENST00000533044 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
GRINA-208ENST00000533044 BIVM-ERCC5R4GMW8 1640 aa16.57■□□□□ 0.24
GRINA-208ENST00000533044 PBRM1Q86U86 1689 aa16.55■□□□□ 0.24
GRINA-208ENST00000533044 ERICH3Q5RHP9 1530 aa16.49■□□□□ 0.23
GRINA-208ENST00000533044 GRIN2AQ12879 1464 aa16.48■□□□□ 0.23
GRINA-208ENST00000533044 FHAD1B1AJZ9 1412 aa16.48■□□□□ 0.23
GRINA-208ENST00000533044 ADAMTS12P58397 1594 aa16.46■□□□□ 0.23
GRINA-208ENST00000533044 NUP160Q12769 1436 aa16.45■□□□□ 0.22
GRINA-208ENST00000533044 CEP170Q5SW79 1584 aa16.36■□□□□ 0.21
GRINA-208ENST00000533044 ERCC6L2Q5T890 1561 aa16.34■□□□□ 0.21
GRINA-208ENST00000533044 SHROOM2Q13796 1616 aa16.34■□□□□ 0.21
GRINA-208ENST00000533044 KIF27Q86VH2 1401 aa16.31■□□□□ 0.2
GRINA-208ENST00000533044 IGF1RP08069 1367 aa16.27■□□□□ 0.2
GRINA-208ENST00000533044 JPH4Q96JJ6 628 aa16.27■□□□□ 0.2
GRINA-208ENST00000533044 PRG4Q92954 1404 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms