RNA–Protein interactions for RNA: ENST00000551396.5

MRPL42-207, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 5

Gene MRPL42, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-207ENST00000551396 AEBP2Q6ZN18 517 aaPredicted RBP25.04■■□□□ 1.6
MRPL42-207ENST00000551396 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
MRPL42-207ENST00000551396 SENP3Q9H4L4 574 aaPredicted RBP21.21■□□□□ 0.99
MRPL42-207ENST00000551396 PHF23Q9BUL5 403 aaPredicted RBP21.04■□□□□ 0.96
MRPL42-207ENST00000551396 FOXD1Q16676 465 aa19.83■□□□□ 0.77
MRPL42-207ENST00000551396 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.65
MRPL42-207ENST00000551396 POTEDQ86YR6 584 aa18.97■□□□□ 0.63
MRPL42-207ENST00000551396 PPP6R1Q9UPN7 881 aa18.75■□□□□ 0.59
MRPL42-207ENST00000551396 ADRA2BP18089 450 aa18.69■□□□□ 0.58
MRPL42-207ENST00000551396 PIAS4Q8N2W9 510 aaPredicted RBP18.56■□□□□ 0.56
MRPL42-207ENST00000551396 MSH5O43196 834 aa18.39■□□□□ 0.53
MRPL42-207ENST00000551396 MAPK8IP2Q13387 824 aaPredicted RBP17.14■□□□□ 0.33
MRPL42-207ENST00000551396 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.31
MRPL42-207ENST00000551396 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
MRPL42-207ENST00000551396 PPP4R3CPQ6ZMV5 832 aa16.85■□□□□ 0.29
MRPL42-207ENST00000551396 KCNA4P22459 653 aa16.6■□□□□ 0.25
MRPL42-207ENST00000551396 CNKSR2Q8WXI2 1034 aa16.45■□□□□ 0.22
MRPL42-207ENST00000551396 HOXD11P31277 338 aaPredicted RBP16.32■□□□□ 0.2
MRPL42-207ENST00000551396 NCBP3Q53F19 620 aaKnown RBP16.3■□□□□ 0.2
MRPL42-207ENST00000551396 DCAF8L1A6NGE4 600 aa16.25■□□□□ 0.19
MRPL42-207ENST00000551396 RNF216Q9NWF9 866 aaPredicted RBP16.24■□□□□ 0.19
MRPL42-207ENST00000551396 NPM3O75607 178 aaKnown RBP16.11■□□□□ 0.17
MRPL42-207ENST00000551396 SLC4A1APQ9BWU0 796 aaKnown RBP15.82■□□□□ 0.12
MRPL42-207ENST00000551396 RNF39Q9H2S5 420 aa15.76■□□□□ 0.11
MRPL42-207ENST00000551396 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
MRPL42-207ENST00000551396 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
MRPL42-207ENST00000551396 DNAJC5BQ9UF47 199 aa15.62■□□□□ 0.09
MRPL42-207ENST00000551396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.098e-10■■■□□ 17.4
MRPL42-207ENST00000551396 C1QBPQ07021 282 aaKnown RBP15.49■□□□□ 0.07
MRPL42-207ENST00000551396 CSRNP3Q8WYN3 585 aa15.39■□□□□ 0.05
MRPL42-207ENST00000551396 ZBTB22O15209 634 aa15.3■□□□□ 0.04
MRPL42-207ENST00000551396 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
MRPL42-207ENST00000551396 SLC4A2P04920 1241 aa15.28■□□□□ 0.04
MRPL42-207ENST00000551396 FOXD4L1Q9NU39 408 aa15.19■□□□□ 0.02
MRPL42-207ENST00000551396 SPINK5Q9NQ38 1064 aaPredicted RBP15.06■□□□□ 0
MRPL42-207ENST00000551396 CAPN15O75808 1086 aa14.98□□□□□ -0.01
MRPL42-207ENST00000551396 MYCNP04198 464 aaPredicted RBP14.85□□□□□ -0.03
MRPL42-207ENST00000551396 DSG3P32926 999 aa14.84□□□□□ -0.03
MRPL42-207ENST00000551396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
MRPL42-207ENST00000551396 TRHP20396 242 aaPredicted RBP14.82□□□□□ -0.04
MRPL42-207ENST00000551396 HNRNPUL2Q1KMD3 747 aaKnown RBP14.82□□□□□ -0.04
MRPL42-207ENST00000551396 SAMD1Q6SPF0 538 aaPredicted RBP14.77□□□□□ -0.05
MRPL42-207ENST00000551396 APLP2Q06481 763 aa14.75□□□□□ -0.05
MRPL42-207ENST00000551396 ABCB7O75027 752 aa14.7□□□□□ -0.06
MRPL42-207ENST00000551396 ZNF219Q9P2Y4 722 aaPredicted RBP14.7□□□□□ -0.06
MRPL42-207ENST00000551396 ATXN8OSP0DMR3 200 aa14.63□□□□□ -0.07
MRPL42-207ENST00000551396 POTEHQ6S545 545 aa14.58□□□□□ -0.08
MRPL42-207ENST00000551396 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
MRPL42-207ENST00000551396 POLA2Q14181 598 aa14.45□□□□□ -0.1
MRPL42-207ENST00000551396 RBM42Q9BTD8 480 aaKnown RBP14.07□□□□□ -0.16
MRPL42-207ENST00000551396 ZBTB12Q9Y330 459 aaPredicted RBP14.05□□□□□ -0.16
MRPL42-207ENST00000551396 OSCARQ8IYS5 282 aa13.98□□□□□ -0.17
MRPL42-207ENST00000551396 MKRN4PQ13434 485 aaPredicted RBP13.87□□□□□ -0.19
MRPL42-207ENST00000551396 FKBP8Q14318 412 aa13.87□□□□□ -0.19
MRPL42-207ENST00000551396 FBLN2P98095 1184 aa13.83□□□□□ -0.2
MRPL42-207ENST00000551396 AKT1S1Q96B36 256 aa13.81□□□□□ -0.2
MRPL42-207ENST00000551396 CHRDL2Q6WN34 429 aa13.76□□□□□ -0.21
MRPL42-207ENST00000551396 REM2Q8IYK8 340 aaPredicted RBP13.74□□□□□ -0.21
MRPL42-207ENST00000551396 SPDYE2BA6NHP3 402 aa13.67□□□□□ -0.22
MRPL42-207ENST00000551396 SPDYE6P0CI01 402 aa13.67□□□□□ -0.22
MRPL42-207ENST00000551396 SPDYE2Q495Y8 402 aa13.67□□□□□ -0.22
MRPL42-207ENST00000551396 SPDYE4A6NLX3 237 aa13.63□□□□□ -0.23
MRPL42-207ENST00000551396 PITPNM1O00562 1244 aa13.6□□□□□ -0.23
MRPL42-207ENST00000551396 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
MRPL42-207ENST00000551396 SSUH2Q9Y2M2 353 aa13.53□□□□□ -0.24
MRPL42-207ENST00000551396 PIP4P2Q8N4L2 257 aa13.5□□□□□ -0.25
MRPL42-207ENST00000551396 PROM2Q8N271 834 aa13.46□□□□□ -0.25
MRPL42-207ENST00000551396 CLEC11AQ9Y240 323 aa13.44□□□□□ -0.26
MRPL42-207ENST00000551396 FXR2P51116 673 aaKnown RBP eCLIP13.41□□□□□ -0.26
MRPL42-207ENST00000551396 PABPN1Q86U42 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
MRPL42-207ENST00000551396 SPDYE1Q8NFV5 336 aaPredicted RBP13.39□□□□□ -0.27
MRPL42-207ENST00000551396 FBXO3Q9UK99 471 aa13.27□□□□□ -0.29
MRPL42-207ENST00000551396 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
MRPL42-207ENST00000551396 PRR29P0C7W0 189 aa13.21□□□□□ -0.29
MRPL42-207ENST00000551396 HAX1O00165 279 aa13.2□□□□□ -0.3
MRPL42-207ENST00000551396 CHADLQ6NUI6 762 aa13.2□□□□□ -0.3
MRPL42-207ENST00000551396 EVX2Q03828 476 aa13.12□□□□□ -0.31
MRPL42-207ENST00000551396 SP7Q8TDD2 431 aaPredicted RBP13.12□□□□□ -0.31
MRPL42-207ENST00000551396 VASPP50552 380 aaPredicted RBP13.11□□□□□ -0.31
MRPL42-207ENST00000551396 STAG3Q9UJ98 1225 aa13.04□□□□□ -0.32
MRPL42-207ENST00000551396 RTN4Q9NQC3 1192 aaKnown RBP13.02□□□□□ -0.33
MRPL42-207ENST00000551396 AMER1Q5JTC6 1135 aaPredicted RBP13.01□□□□□ -0.33
MRPL42-207ENST00000551396 IFNLR1Q8IU57 520 aaPredicted RBP12.99□□□□□ -0.33
MRPL42-207ENST00000551396 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
MRPL42-207ENST00000551396 FARP1Q9Y4F1 1045 aaPredicted RBP12.95□□□□□ -0.34
MRPL42-207ENST00000551396 CREBZFQ9NS37 354 aa12.94□□□□□ -0.34
MRPL42-207ENST00000551396 MIER1Q8N108 512 aa12.89□□□□□ -0.35
MRPL42-207ENST00000551396 PLCD3Q8N3E9 789 aa12.89□□□□□ -0.35
MRPL42-207ENST00000551396 CD44P16070 742 aaKnown RBP12.83□□□□□ -0.36
MRPL42-207ENST00000551396 KLHL34Q8N239 644 aa12.82□□□□□ -0.36
MRPL42-207ENST00000551396 GABBR2O75899 941 aa12.77□□□□□ -0.37
MRPL42-207ENST00000551396 PLEKHG5O94827 1062 aa12.76□□□□□ -0.37
MRPL42-207ENST00000551396 SPOCK2Q92563 424 aa12.76□□□□□ -0.37
MRPL42-207ENST00000551396 MNX1P50219 401 aaPredicted RBP12.75□□□□□ -0.37
MRPL42-207ENST00000551396 ZBTB47Q9UFB7 747 aaPredicted RBP12.71□□□□□ -0.37
MRPL42-207ENST00000551396 ZRANB1Q9UGI0 708 aa12.69□□□□□ -0.38
MRPL42-207ENST00000551396 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
MRPL42-207ENST00000551396 PKD2Q13563 968 aa12.64□□□□□ -0.39
MRPL42-207ENST00000551396 ZNF579Q8NAF0 562 aaKnown RBP12.6□□□□□ -0.39
MRPL42-207ENST00000551396 NUBP1P53384 320 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms