RNA–Protein interactions for RNA: ENST00000467487.3

KDM5B-205, Transcript of lysine demethylase 5B, humanhuman

TSL 3

Gene KDM5B, Length 529 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-205ENST00000467487 NISCHQ9Y2I1 1504 aa43.11■■■■■ 4.49
KDM5B-205ENST00000467487 CCDC180Q9P1Z9 1646 aa38.08■■■■□ 3.69
KDM5B-205ENST00000467487 ABCC9O60706 1549 aa36.86■■■■□ 3.49
KDM5B-205ENST00000467487 ZCCHC6Q5VYS8 1495 aaKnown RBP36.04■■■■□ 3.36
KDM5B-205ENST00000467487 DCAF8L2P0C7V8 631 aa35.79■■■■□ 3.32
KDM5B-205ENST00000467487 NACADO15069 1562 aa35.69■■■■□ 3.3
KDM5B-205ENST00000467487 DCAF1Q9Y4B6 1507 aa35.67■■■■□ 3.3
KDM5B-205ENST00000467487 MYO15BQ96JP2 1530 aa35.63■■■■□ 3.29
KDM5B-205ENST00000467487 RB1CC1Q8TDY2 1594 aa35.61■■■■□ 3.29
KDM5B-205ENST00000467487 SCRIBQ14160 1630 aa34.84■■■■□ 3.17
KDM5B-205ENST00000467487 UNC13AQ9UPW8 1703 aa34.82■■■■□ 3.16
KDM5B-205ENST00000467487 BICRAQ9NZM4 1560 aa34.58■■■■□ 3.13
KDM5B-205ENST00000467487 PABPN1Q86U42 306 aaKnown RBP eCLIP34.53■■■■□ 3.12
KDM5B-205ENST00000467487 SHROOM4Q9ULL8 1493 aa34.39■■■■□ 3.1
KDM5B-205ENST00000467487 EIF4G1Q04637 1599 aaKnown RBP33.61■■■□□ 2.97
KDM5B-205ENST00000467487 CECR2Q9BXF3 1484 aa33.57■■■□□ 2.97
KDM5B-205ENST00000467487 DNAJC5BQ9UF47 199 aa33.43■■■□□ 2.94
KDM5B-205ENST00000467487 BAZ1AQ9NRL2 1556 aaPredicted RBP33.37■■■□□ 2.93
KDM5B-205ENST00000467487 SMARCA4P51532 1647 aa33.35■■■□□ 2.93
KDM5B-205ENST00000467487 CC2D2AQ9P2K1 1620 aa33.35■■■□□ 2.93
KDM5B-205ENST00000467487 MROH2BQ7Z745 1585 aa33.26■■■□□ 2.92
KDM5B-205ENST00000467487 ATAD2BQ9ULI0 1458 aa33.06■■■□□ 2.88
KDM5B-205ENST00000467487 RSF1Q96T23 1441 aaPredicted RBP33.04■■■□□ 2.88
KDM5B-205ENST00000467487 PEG3Q9GZU2 1588 aa33.01■■■□□ 2.88
KDM5B-205ENST00000467487 SMARCA2P51531 1590 aa33■■■□□ 2.87
KDM5B-205ENST00000467487 NCAPD3P42695 1498 aa32.95■■■□□ 2.87
KDM5B-205ENST00000467487 WIZO95785 1651 aa32.92■■■□□ 2.86
KDM5B-205ENST00000467487 HMGXB3Q12766 1538 aa32.82■■■□□ 2.85
KDM5B-205ENST00000467487 BAZ1BQ9UIG0 1483 aaKnown RBP32.8■■■□□ 2.84
KDM5B-205ENST00000467487 TOP2AP11388 1531 aaKnown RBP32.59■■■□□ 2.81
KDM5B-205ENST00000467487 SUPT5HO00267 1087 aaKnown RBP32.54■■■□□ 2.8
KDM5B-205ENST00000467487 CCDC88BA6NC98 1476 aa32.21■■■□□ 2.75
KDM5B-205ENST00000467487 NESP48681 1621 aa32.06■■■□□ 2.72
KDM5B-205ENST00000467487 CADPSQ9ULU8 1353 aa32.01■■■□□ 2.71
KDM5B-205ENST00000467487 LAMC3Q9Y6N6 1575 aa31.98■■■□□ 2.71
KDM5B-205ENST00000467487 CFTRP13569 1480 aa31.93■■■□□ 2.7
KDM5B-205ENST00000467487 PDS5BQ9NTI5 1447 aa31.75■■■□□ 2.67
KDM5B-205ENST00000467487 ERCC6Q03468 1493 aa31.7■■■□□ 2.66
KDM5B-205ENST00000467487 PRDM2Q13029 1718 aa31.67■■■□□ 2.66
KDM5B-205ENST00000467487 FANCD2Q9BXW9 1451 aa31.66■■■□□ 2.66
KDM5B-205ENST00000467487 KIF21AQ7Z4S6 1674 aa31.65■■■□□ 2.66
KDM5B-205ENST00000467487 CEP164Q9UPV0 1460 aa31.56■■■□□ 2.64
KDM5B-205ENST00000467487 THOC2Q8NI27 1593 aaKnown RBP31.46■■■□□ 2.63
KDM5B-205ENST00000467487 MRC2Q9UBG0 1479 aa31.43■■■□□ 2.62
KDM5B-205ENST00000467487 URB2Q14146 1524 aaKnown RBP31.34■■■□□ 2.61
KDM5B-205ENST00000467487 WDR62O43379 1518 aa31.32■■■□□ 2.6
KDM5B-205ENST00000467487 TOPBP1Q92547 1522 aa31.21■■■□□ 2.59
KDM5B-205ENST00000467487 DNMBPQ6XZF7 1577 aa31.21■■■□□ 2.59
KDM5B-205ENST00000467487 ABCC8Q09428 1581 aa31.2■■■□□ 2.58
KDM5B-205ENST00000467487 CUX2O14529 1486 aa31.18■■■□□ 2.58
KDM5B-205ENST00000467487 CUX1P39880 1505 aa31.17■■■□□ 2.58
KDM5B-205ENST00000467487 WRNQ14191 1432 aaPredicted RBP eCLIP31.13■■■□□ 2.57
KDM5B-205ENST00000467487 SYNJ1O43426 1573 aa31.06■■■□□ 2.56
KDM5B-205ENST00000467487 TOP2BQ02880 1626 aa31■■■□□ 2.55
KDM5B-205ENST00000467487 BIVM-ERCC5R4GMW8 1640 aa30.99■■■□□ 2.55
KDM5B-205ENST00000467487 POLA1P09884 1462 aaPredicted RBP30.99■■■□□ 2.55
KDM5B-205ENST00000467487 FGD5Q6ZNL6 1462 aa30.99■■■□□ 2.55
KDM5B-205ENST00000467487 IFT140Q96RY7 1462 aa30.87■■■□□ 2.53
KDM5B-205ENST00000467487 RAD54L2Q9Y4B4 1467 aa30.87■■■□□ 2.53
KDM5B-205ENST00000467487 SOGA1O94964 1423 aa30.84■■■□□ 2.53
KDM5B-205ENST00000467487 TARBP1Q13395 1621 aaKnown RBP30.84■■■□□ 2.53
KDM5B-205ENST00000467487 ZNF608Q9ULD9 1512 aaPredicted RBP30.74■■■□□ 2.51
KDM5B-205ENST00000467487 WDR97A6NE52 1622 aa30.7■■■□□ 2.51
KDM5B-205ENST00000467487 TRIM41Q8WV44 630 aa30.69■■■□□ 2.5
KDM5B-205ENST00000467487 ABCA10Q8WWZ4 1543 aa30.68■■■□□ 2.5
KDM5B-205ENST00000467487 CHIC1Q5VXU3 224 aa30.66■■■□□ 2.5
KDM5B-205ENST00000467487 TDRD9Q8NDG6 1382 aaKnown RBP30.64■■■□□ 2.5
KDM5B-205ENST00000467487 EIF4G3O43432 1585 aaKnown RBP30.63■■■□□ 2.49
KDM5B-205ENST00000467487 AQRO60306 1485 aaKnown RBP eCLIP30.61■■■□□ 2.497e-7■□□□□ 9
KDM5B-205ENST00000467487 ABCA5Q8WWZ7 1642 aa30.55■■■□□ 2.48
KDM5B-205ENST00000467487 GAPVD1Q14C86 1478 aa30.49■■■□□ 2.47
KDM5B-205ENST00000467487 GRIN2BQ13224 1484 aa30.43■■■□□ 2.46
KDM5B-205ENST00000467487 KIF27Q86VH2 1401 aa30.41■■■□□ 2.46
KDM5B-205ENST00000467487 PBRM1Q86U86 1689 aa30.39■■■□□ 2.46
KDM5B-205ENST00000467487 RUSC2Q8N2Y8 1516 aa30.37■■■□□ 2.45
KDM5B-205ENST00000467487 SNAPC4Q5SXM2 1469 aa30.35■■■□□ 2.45
KDM5B-205ENST00000467487 ERICH3Q5RHP9 1530 aa30.32■■■□□ 2.44
KDM5B-205ENST00000467487 MAGI1Q96QZ7 1491 aaPredicted RBP30.28■■■□□ 2.44
KDM5B-205ENST00000467487 IGF1RP08069 1367 aa30.26■■■□□ 2.43
KDM5B-205ENST00000467487 ADAMTS12P58397 1594 aa30.22■■■□□ 2.43
KDM5B-205ENST00000467487 SYNJ2O15056 1496 aa30.18■■■□□ 2.42
KDM5B-205ENST00000467487 FHAD1B1AJZ9 1412 aa30.15■■■□□ 2.42
KDM5B-205ENST00000467487 EEA1Q15075 1411 aa30.13■■■□□ 2.41
KDM5B-205ENST00000467487 CUL7Q14999 1698 aa30.13■■■□□ 2.41
KDM5B-205ENST00000467487 CHD1O14646 1710 aa30.12■■■□□ 2.41
KDM5B-205ENST00000467487 FBLN2P98095 1184 aa30.11■■■□□ 2.41
KDM5B-205ENST00000467487 FAM9AQ8IZU1 332 aaPredicted RBP30.09■■■□□ 2.41
KDM5B-205ENST00000467487 CHMP7Q8WUX9 453 aaPredicted RBP30.09■■■□□ 2.41
KDM5B-205ENST00000467487 CARMIL1Q5VZK9 1371 aa30.07■■■□□ 2.4
KDM5B-205ENST00000467487 GRIN2AQ12879 1464 aa30.06■■■□□ 2.4
KDM5B-205ENST00000467487 CSRNP3Q8WYN3 585 aa30.04■■■□□ 2.4
KDM5B-205ENST00000467487 PRXQ9BXM0 1461 aa29.99■■■□□ 2.39
KDM5B-205ENST00000467487 OSCARQ8IYS5 282 aa29.95■■■□□ 2.39
KDM5B-205ENST00000467487 RAPGEF2Q9Y4G8 1499 aa29.94■■■□□ 2.38
KDM5B-205ENST00000467487 CEP170Q5SW79 1584 aa29.9■■■□□ 2.38
KDM5B-205ENST00000467487 NUP160Q12769 1436 aa29.9■■■□□ 2.38
KDM5B-205ENST00000467487 CLASP1Q7Z460 1538 aa29.84■■■□□ 2.37
KDM5B-205ENST00000467487 KIF21BO75037 1637 aa29.82■■■□□ 2.36
KDM5B-205ENST00000467487 KIAA0586Q9BVV6 1533 aa29.71■■■□□ 2.35
KDM5B-205ENST00000467487 GOLGA3Q08378 1498 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms