RNA–Protein interactions for RNA: ENST00000552326.5

MRPL42-209, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 4

Gene MRPL42, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-209ENST00000552326 AEBP2Q6ZN18 517 aaPredicted RBP22.51■■□□□ 1.19
MRPL42-209ENST00000552326 CHIC1Q5VXU3 224 aa21.94■■□□□ 1.1
MRPL42-209ENST00000552326 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
MRPL42-209ENST00000552326 PHF23Q9BUL5 403 aaPredicted RBP19.21■□□□□ 0.67
MRPL42-209ENST00000552326 FOXD1Q16676 465 aa17.79■□□□□ 0.44
MRPL42-209ENST00000552326 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
MRPL42-209ENST00000552326 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
MRPL42-209ENST00000552326 ADRA2BP18089 450 aa16.94■□□□□ 0.3
MRPL42-209ENST00000552326 PIAS4Q8N2W9 510 aaPredicted RBP16.74■□□□□ 0.27
MRPL42-209ENST00000552326 MSH5O43196 834 aa16.54■□□□□ 0.24
MRPL42-209ENST00000552326 POTEDQ86YR6 584 aa16.53■□□□□ 0.24
MRPL42-209ENST00000552326 SCAF1Q9H7N4 1312 aaKnown RBP15.66■□□□□ 0.1
MRPL42-209ENST00000552326 PPP4R3CPQ6ZMV5 832 aa15.61■□□□□ 0.09
MRPL42-209ENST00000552326 MAPK8IP2Q13387 824 aaPredicted RBP15.39■□□□□ 0.05
MRPL42-209ENST00000552326 DMRT2Q9Y5R5 561 aa15.31■□□□□ 0.04
MRPL42-209ENST00000552326 CNKSR2Q8WXI2 1034 aa15.25■□□□□ 0.03
MRPL42-209ENST00000552326 NCBP3Q53F19 620 aaKnown RBP15.23■□□□□ 0.03
MRPL42-209ENST00000552326 KCNA4P22459 653 aa15.11■□□□□ 0.01
MRPL42-209ENST00000552326 RNF216Q9NWF9 866 aaPredicted RBP14.99□□□□□ -0.01
MRPL42-209ENST00000552326 HOXD11P31277 338 aaPredicted RBP14.96□□□□□ -0.01
MRPL42-209ENST00000552326 NPM3O75607 178 aaKnown RBP14.93□□□□□ -0.02
MRPL42-209ENST00000552326 DNAJC5BQ9UF47 199 aa14.67□□□□□ -0.06
MRPL42-209ENST00000552326 DCAF8L1A6NGE4 600 aa14.56□□□□□ -0.08
MRPL42-209ENST00000552326 EHMT2Q96KQ7 1210 aa14.53□□□□□ -0.08
MRPL42-209ENST00000552326 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
MRPL42-209ENST00000552326 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.21□□□□□ -0.138e-10■■■□□ 17.4
MRPL42-209ENST00000552326 CACNB1Q02641 598 aaPredicted RBP14.2□□□□□ -0.14
MRPL42-209ENST00000552326 SLC4A2P04920 1241 aa14.12□□□□□ -0.15
MRPL42-209ENST00000552326 RNF39Q9H2S5 420 aa14.12□□□□□ -0.15
MRPL42-209ENST00000552326 CSRNP3Q8WYN3 585 aa14.06□□□□□ -0.16
MRPL42-209ENST00000552326 C1QBPQ07021 282 aaKnown RBP13.99□□□□□ -0.17
MRPL42-209ENST00000552326 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
MRPL42-209ENST00000552326 U3KPZ7 1027 aaPredicted RBP13.95□□□□□ -0.18
MRPL42-209ENST00000552326 ZBTB22O15209 634 aa13.9□□□□□ -0.18
MRPL42-209ENST00000552326 MYCNP04198 464 aaPredicted RBP13.85□□□□□ -0.19
MRPL42-209ENST00000552326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.84□□□□□ -0.19
MRPL42-209ENST00000552326 HNRNPUL2Q1KMD3 747 aaKnown RBP13.84□□□□□ -0.19
MRPL42-209ENST00000552326 APLP2Q06481 763 aa13.76□□□□□ -0.21
MRPL42-209ENST00000552326 SAMD1Q6SPF0 538 aaPredicted RBP13.76□□□□□ -0.21
MRPL42-209ENST00000552326 ATXN8OSP0DMR3 200 aa13.56□□□□□ -0.24
MRPL42-209ENST00000552326 SPINK5Q9NQ38 1064 aaPredicted RBP13.56□□□□□ -0.24
MRPL42-209ENST00000552326 CAPN15O75808 1086 aa13.55□□□□□ -0.24
MRPL42-209ENST00000552326 ZNF219Q9P2Y4 722 aaPredicted RBP13.53□□□□□ -0.24
MRPL42-209ENST00000552326 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
MRPL42-209ENST00000552326 DSG3P32926 999 aa13.38□□□□□ -0.27
MRPL42-209ENST00000552326 ATF5Q9Y2D1 282 aaPredicted RBP13.38□□□□□ -0.27
MRPL42-209ENST00000552326 ABCB7O75027 752 aa13.22□□□□□ -0.29
MRPL42-209ENST00000552326 POLA2Q14181 598 aa13.21□□□□□ -0.29
MRPL42-209ENST00000552326 ZBTB12Q9Y330 459 aaPredicted RBP13.09□□□□□ -0.31
MRPL42-209ENST00000552326 FBLN2P98095 1184 aa12.93□□□□□ -0.34
MRPL42-209ENST00000552326 POTEHQ6S545 545 aa12.89□□□□□ -0.35
MRPL42-209ENST00000552326 RBM42Q9BTD8 480 aaKnown RBP12.83□□□□□ -0.36
MRPL42-209ENST00000552326 MKRN4PQ13434 485 aaPredicted RBP12.82□□□□□ -0.36
MRPL42-209ENST00000552326 FKBP8Q14318 412 aa12.77□□□□□ -0.37
MRPL42-209ENST00000552326 OSCARQ8IYS5 282 aa12.74□□□□□ -0.37
MRPL42-209ENST00000552326 SPDYE2BA6NHP3 402 aa12.69□□□□□ -0.38
MRPL42-209ENST00000552326 SPDYE6P0CI01 402 aa12.69□□□□□ -0.38
MRPL42-209ENST00000552326 SPDYE2Q495Y8 402 aa12.69□□□□□ -0.38
MRPL42-209ENST00000552326 AKT1S1Q96B36 256 aa12.62□□□□□ -0.39
MRPL42-209ENST00000552326 ZNF692Q9BU19 519 aaPredicted RBP12.58□□□□□ -0.4
MRPL42-209ENST00000552326 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
MRPL42-209ENST00000552326 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
MRPL42-209ENST00000552326 REM2Q8IYK8 340 aaPredicted RBP12.44□□□□□ -0.42
MRPL42-209ENST00000552326 RTN4Q9NQC3 1192 aaKnown RBP12.43□□□□□ -0.42
MRPL42-209ENST00000552326 PABPN1Q86U42 306 aaKnown RBP eCLIP12.38□□□□□ -0.43
MRPL42-209ENST00000552326 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
MRPL42-209ENST00000552326 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
MRPL42-209ENST00000552326 PROM2Q8N271 834 aa12.33□□□□□ -0.44
MRPL42-209ENST00000552326 PITPNM1O00562 1244 aa12.28□□□□□ -0.44
MRPL42-209ENST00000552326 CHRDL2Q6WN34 429 aa12.27□□□□□ -0.45
MRPL42-209ENST00000552326 STAG3Q9UJ98 1225 aa12.26□□□□□ -0.45
MRPL42-209ENST00000552326 CLEC11AQ9Y240 323 aa12.21□□□□□ -0.45
MRPL42-209ENST00000552326 PRR29P0C7W0 189 aa12.13□□□□□ -0.47
MRPL42-209ENST00000552326 FXR2P51116 673 aaKnown RBP eCLIP12.13□□□□□ -0.47
MRPL42-209ENST00000552326 FBXO3Q9UK99 471 aa12.12□□□□□ -0.47
MRPL42-209ENST00000552326 PIP4P2Q8N4L2 257 aa12.07□□□□□ -0.48
MRPL42-209ENST00000552326 SLC24A1O60721 1099 aa12.04□□□□□ -0.48
MRPL42-209ENST00000552326 VASPP50552 380 aaPredicted RBP12.01□□□□□ -0.49
MRPL42-209ENST00000552326 PRKAR2AP13861 404 aaKnown RBP11.98□□□□□ -0.49
MRPL42-209ENST00000552326 CREBZFQ9NS37 354 aa11.93□□□□□ -0.5
MRPL42-209ENST00000552326 CHADLQ6NUI6 762 aa11.9□□□□□ -0.5
MRPL42-209ENST00000552326 SP7Q8TDD2 431 aaPredicted RBP11.9□□□□□ -0.5
MRPL42-209ENST00000552326 PLEKHG5O94827 1062 aa11.89□□□□□ -0.51
MRPL42-209ENST00000552326 IFNLR1Q8IU57 520 aaPredicted RBP11.86□□□□□ -0.51
MRPL42-209ENST00000552326 MIER1Q8N108 512 aa11.86□□□□□ -0.51
MRPL42-209ENST00000552326 PLCD3Q8N3E9 789 aa11.84□□□□□ -0.51
MRPL42-209ENST00000552326 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
MRPL42-209ENST00000552326 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
MRPL42-209ENST00000552326 NPM1P06748 294 aaKnown RBP eCLIP11.8□□□□□ -0.52
MRPL42-209ENST00000552326 MNX1P50219 401 aaPredicted RBP11.79□□□□□ -0.52
MRPL42-209ENST00000552326 KLHL34Q8N239 644 aa11.79□□□□□ -0.52
MRPL42-209ENST00000552326 C19orf67A6NJJ6 358 aa11.71□□□□□ -0.53
MRPL42-209ENST00000552326 HAX1O00165 279 aa11.71□□□□□ -0.53
MRPL42-209ENST00000552326 SPOCK2Q92563 424 aa11.66□□□□□ -0.54
MRPL42-209ENST00000552326 DCAF8L2P0C7V8 631 aa11.64□□□□□ -0.55
MRPL42-209ENST00000552326 CD44P16070 742 aaKnown RBP11.64□□□□□ -0.55
MRPL42-209ENST00000552326 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
MRPL42-209ENST00000552326 NUBP1P53384 320 aa11.59□□□□□ -0.55
MRPL42-209ENST00000552326 PKD2Q13563 968 aa11.57□□□□□ -0.56
MRPL42-209ENST00000552326 EVX2Q03828 476 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms