Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.3■■□□□ 1
FREM1Q5H8C1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FREM1Q5H8C1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.3■■□□□ 1
FREM1Q5H8C1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FREM1Q5H8C1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
FREM1Q5H8C1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FREM1Q5H8C1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
FREM1Q5H8C1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FREM1Q5H8C1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.29■■□□□ 1
FREM1Q5H8C1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.29■■□□□ 1
FREM1Q5H8C1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
FREM1Q5H8C1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.29■■□□□ 1
FREM1Q5H8C1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FREM1Q5H8C1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.28■■□□□ 1
FREM1Q5H8C1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.28■■□□□ 1
FREM1Q5H8C1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.28■■□□□ 1
FREM1Q5H8C1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.28■■□□□ 1
FREM1Q5H8C1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.28■■□□□ 1
FREM1Q5H8C1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FREM1Q5H8C1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
FREM1Q5H8C1 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.27■■□□□ 1
FREM1Q5H8C1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.26■□□□□ 0.99
FREM1Q5H8C1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FREM1Q5H8C1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.26■□□□□ 0.99
FREM1Q5H8C1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.26■□□□□ 0.99
FREM1Q5H8C1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
FREM1Q5H8C1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FREM1Q5H8C1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FREM1Q5H8C1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FREM1Q5H8C1 RARRES2P1-201ENST00000474487 481 ntBASIC21.25■□□□□ 0.99
FREM1Q5H8C1 AC139795.1-202ENST00000500444 432 ntBASIC21.25■□□□□ 0.99
FREM1Q5H8C1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FREM1Q5H8C1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FREM1Q5H8C1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
FREM1Q5H8C1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.24■□□□□ 0.99
FREM1Q5H8C1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
FREM1Q5H8C1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FREM1Q5H8C1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.24■□□□□ 0.99
FREM1Q5H8C1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.24■□□□□ 0.99
FREM1Q5H8C1 AC096887.2-201ENST00000623443 1957 ntBASIC21.24■□□□□ 0.99
FREM1Q5H8C1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.24■□□□□ 0.99
FREM1Q5H8C1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FREM1Q5H8C1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FREM1Q5H8C1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FREM1Q5H8C1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.23■□□□□ 0.99
FREM1Q5H8C1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.23■□□□□ 0.99
FREM1Q5H8C1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
FREM1Q5H8C1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
FREM1Q5H8C1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FREM1Q5H8C1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FREM1Q5H8C1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.22■□□□□ 0.99
FREM1Q5H8C1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
FREM1Q5H8C1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.21■□□□□ 0.99
FREM1Q5H8C1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FREM1Q5H8C1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FREM1Q5H8C1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FREM1Q5H8C1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FREM1Q5H8C1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FREM1Q5H8C1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.2■□□□□ 0.98
FREM1Q5H8C1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FREM1Q5H8C1 AC092803.2-201ENST00000564287 1899 ntBASIC21.2■□□□□ 0.98
FREM1Q5H8C1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
FREM1Q5H8C1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.2■□□□□ 0.98
FREM1Q5H8C1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FREM1Q5H8C1 AC087393.1-201ENST00000582896 145 ntBASIC21.19■□□□□ 0.98
FREM1Q5H8C1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FREM1Q5H8C1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FREM1Q5H8C1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
FREM1Q5H8C1 MIR4508-201ENST00000584178 70 ntBASIC21.19■□□□□ 0.98
FREM1Q5H8C1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.19■□□□□ 0.98
FREM1Q5H8C1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FREM1Q5H8C1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.18■□□□□ 0.98
FREM1Q5H8C1 AC103724.3-201ENST00000564481 992 ntBASIC21.18■□□□□ 0.98
FREM1Q5H8C1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.18■□□□□ 0.98
FREM1Q5H8C1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
FREM1Q5H8C1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
FREM1Q5H8C1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
FREM1Q5H8C1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FREM1Q5H8C1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FREM1Q5H8C1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FREM1Q5H8C1 AC010980.1-201ENST00000587192 1142 ntBASIC21.17■□□□□ 0.98
FREM1Q5H8C1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.17■□□□□ 0.98
FREM1Q5H8C1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
FREM1Q5H8C1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FREM1Q5H8C1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FREM1Q5H8C1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FREM1Q5H8C1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.16■□□□□ 0.98
FREM1Q5H8C1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FREM1Q5H8C1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
FREM1Q5H8C1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
FREM1Q5H8C1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
FREM1Q5H8C1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FREM1Q5H8C1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
FREM1Q5H8C1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.15■□□□□ 0.98
FREM1Q5H8C1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FREM1Q5H8C1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FREM1Q5H8C1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.15■□□□□ 0.98
FREM1Q5H8C1 RPS2P7-201ENST00000447334 885 ntBASIC21.14■□□□□ 0.98
FREM1Q5H8C1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
FREM1Q5H8C1 AC010501.1-201ENST00000606270 1962 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms