Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2D3P61077 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBE2D3P61077 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.02■□□□□ 0.31
UBE2D3P61077 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2D3P61077 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2D3P61077 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.01■□□□□ 0.31
UBE2D3P61077 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.01■□□□□ 0.31
UBE2D3P61077 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2D3P61077 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.01■□□□□ 0.31
UBE2D3P61077 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
UBE2D3P61077 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
UBE2D3P61077 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.01■□□□□ 0.31
UBE2D3P61077 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
UBE2D3P61077 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2D3P61077 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2D3P61077 MIR3648-2-201ENST00000581792 180 ntBASIC17■□□□□ 0.31
UBE2D3P61077 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
UBE2D3P61077 MIR3648-1-201ENST00000615959 180 ntBASIC17■□□□□ 0.31
UBE2D3P61077 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17■□□□□ 0.31
UBE2D3P61077 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
UBE2D3P61077 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17■□□□□ 0.31
UBE2D3P61077 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2D3P61077 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
UBE2D3P61077 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2D3P61077 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2D3P61077 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2D3P61077 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2D3P61077 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2D3P61077 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.99■□□□□ 0.31
UBE2D3P61077 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.99■□□□□ 0.31
UBE2D3P61077 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2D3P61077 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2D3P61077 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2D3P61077 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.99■□□□□ 0.31
UBE2D3P61077 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBE2D3P61077 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBE2D3P61077 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.98■□□□□ 0.31
UBE2D3P61077 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
UBE2D3P61077 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
UBE2D3P61077 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBE2D3P61077 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
UBE2D3P61077 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2D3P61077 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2D3P61077 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2D3P61077 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2D3P61077 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2D3P61077 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.97■□□□□ 0.31
UBE2D3P61077 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2D3P61077 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2D3P61077 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
UBE2D3P61077 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.96■□□□□ 0.31
UBE2D3P61077 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
UBE2D3P61077 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2D3P61077 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.96■□□□□ 0.31
UBE2D3P61077 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
UBE2D3P61077 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2D3P61077 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
UBE2D3P61077 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D3P61077 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D3P61077 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D3P61077 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D3P61077 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D3P61077 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D3P61077 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
UBE2D3P61077 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D3P61077 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D3P61077 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
UBE2D3P61077 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2D3P61077 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2D3P61077 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.94■□□□□ 0.3
UBE2D3P61077 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
UBE2D3P61077 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.94■□□□□ 0.3
UBE2D3P61077 METRNL-202ENST00000570778 967 ntTSL 5 BASIC16.94■□□□□ 0.3
UBE2D3P61077 AC016575.1-201ENST00000607026 382 ntBASIC16.94■□□□□ 0.3
UBE2D3P61077 AC096887.2-201ENST00000623443 1957 ntBASIC16.94■□□□□ 0.3
UBE2D3P61077 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.94■□□□□ 0.3
UBE2D3P61077 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.94■□□□□ 0.3
UBE2D3P61077 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2D3P61077 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2D3P61077 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2D3P61077 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
UBE2D3P61077 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2D3P61077 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC16.93■□□□□ 0.3
UBE2D3P61077 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2D3P61077 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.93■□□□□ 0.3
UBE2D3P61077 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
UBE2D3P61077 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2D3P61077 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2D3P61077 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2D3P61077 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2D3P61077 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2D3P61077 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.92■□□□□ 0.3
UBE2D3P61077 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
UBE2D3P61077 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.92■□□□□ 0.3
UBE2D3P61077 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2D3P61077 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2D3P61077 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2D3P61077 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
UBE2D3P61077 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.91■□□□□ 0.3
UBE2D3P61077 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms