Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN1AP38936 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN1AP38936 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CDKN1AP38936 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN1AP38936 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.55■□□□□ 0.88
CDKN1AP38936 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
CDKN1AP38936 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDKN1AP38936 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CDKN1AP38936 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDKN1AP38936 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
CDKN1AP38936 AC239859.2-201ENST00000444165 318 ntBASIC20.54■□□□□ 0.88
CDKN1AP38936 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.54■□□□□ 0.88
CDKN1AP38936 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKN1AP38936 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CDKN1AP38936 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKN1AP38936 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDKN1AP38936 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CDKN1AP38936 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKN1AP38936 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKN1AP38936 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDKN1AP38936 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKN1AP38936 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.52■□□□□ 0.88
CDKN1AP38936 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKN1AP38936 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKN1AP38936 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKN1AP38936 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKN1AP38936 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDKN1AP38936 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKN1AP38936 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKN1AP38936 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKN1AP38936 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKN1AP38936 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKN1AP38936 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.5■□□□□ 0.87
CDKN1AP38936 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKN1AP38936 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKN1AP38936 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKN1AP38936 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.5■□□□□ 0.87
CDKN1AP38936 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDKN1AP38936 AL356441.2-201ENST00000443009 864 ntBASIC20.5■□□□□ 0.87
CDKN1AP38936 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKN1AP38936 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDKN1AP38936 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKN1AP38936 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.49■□□□□ 0.87
CDKN1AP38936 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CDKN1AP38936 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.49■□□□□ 0.87
CDKN1AP38936 BX255925.1-201ENST00000566954 1854 ntBASIC20.49■□□□□ 0.87
CDKN1AP38936 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CDKN1AP38936 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKN1AP38936 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CDKN1AP38936 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKN1AP38936 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDKN1AP38936 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
CDKN1AP38936 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.48■□□□□ 0.87
CDKN1AP38936 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CDKN1AP38936 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDKN1AP38936 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKN1AP38936 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDKN1AP38936 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.47■□□□□ 0.87
CDKN1AP38936 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDKN1AP38936 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKN1AP38936 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDKN1AP38936 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDKN1AP38936 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN1AP38936 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN1AP38936 KRT18P10-201ENST00000388836 1287 ntBASIC20.45■□□□□ 0.86
CDKN1AP38936 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.45■□□□□ 0.86
CDKN1AP38936 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN1AP38936 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CDKN1AP38936 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKN1AP38936 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDKN1AP38936 AC142472.1-201ENST00000612013 1741 ntBASIC20.44■□□□□ 0.86
CDKN1AP38936 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDKN1AP38936 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDKN1AP38936 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.44■□□□□ 0.86
CDKN1AP38936 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDKN1AP38936 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.44■□□□□ 0.86
CDKN1AP38936 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.44■□□□□ 0.86
CDKN1AP38936 Z92544.1-202ENST00000571933 1220 ntBASIC20.44■□□□□ 0.86
CDKN1AP38936 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDKN1AP38936 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CDKN1AP38936 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.43■□□□□ 0.86
CDKN1AP38936 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKN1AP38936 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKN1AP38936 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.43■□□□□ 0.86
CDKN1AP38936 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKN1AP38936 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKN1AP38936 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.43■□□□□ 0.86
CDKN1AP38936 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CDKN1AP38936 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKN1AP38936 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.43■□□□□ 0.86
CDKN1AP38936 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKN1AP38936 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKN1AP38936 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.42■□□□□ 0.86
CDKN1AP38936 AP004609.3-201ENST00000610705 1884 ntBASIC20.42■□□□□ 0.86
CDKN1AP38936 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.42■□□□□ 0.86
CDKN1AP38936 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKN1AP38936 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKN1AP38936 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDKN1AP38936 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CDKN1AP38936 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms