Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
SFTPBP07988 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.69■□□□□ 0.9
SFTPBP07988 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SFTPBP07988 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SFTPBP07988 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SFTPBP07988 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SFTPBP07988 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SFTPBP07988 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.68■□□□□ 0.9
SFTPBP07988 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SFTPBP07988 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.68■□□□□ 0.9
SFTPBP07988 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SFTPBP07988 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SFTPBP07988 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.67■□□□□ 0.9
SFTPBP07988 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.67■□□□□ 0.9
SFTPBP07988 AC010501.1-201ENST00000606270 1962 ntBASIC20.67■□□□□ 0.9
SFTPBP07988 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SFTPBP07988 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SFTPBP07988 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SFTPBP07988 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.66■□□□□ 0.9
SFTPBP07988 AC022413.1-201ENST00000624602 984 ntBASIC20.66■□□□□ 0.9
SFTPBP07988 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
SFTPBP07988 AL359504.2-201ENST00000605506 1601 ntBASIC20.66■□□□□ 0.9
SFTPBP07988 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SFTPBP07988 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SFTPBP07988 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.65■□□□□ 0.9
SFTPBP07988 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SFTPBP07988 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SFTPBP07988 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SFTPBP07988 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SFTPBP07988 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SFTPBP07988 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SFTPBP07988 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.64■□□□□ 0.89
SFTPBP07988 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.64■□□□□ 0.89
SFTPBP07988 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.64■□□□□ 0.89
SFTPBP07988 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SFTPBP07988 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SFTPBP07988 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SFTPBP07988 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.63■□□□□ 0.89
SFTPBP07988 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.63■□□□□ 0.89
SFTPBP07988 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SFTPBP07988 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SFTPBP07988 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SFTPBP07988 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SFTPBP07988 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.62■□□□□ 0.89
SFTPBP07988 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SFTPBP07988 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SFTPBP07988 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SFTPBP07988 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SFTPBP07988 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SFTPBP07988 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SFTPBP07988 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SFTPBP07988 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SFTPBP07988 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.61■□□□□ 0.89
SFTPBP07988 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SFTPBP07988 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SFTPBP07988 AC093323.1-202ENST00000635031 2045 ntBASIC20.6■□□□□ 0.89
SFTPBP07988 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.6■□□□□ 0.89
SFTPBP07988 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SFTPBP07988 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SFTPBP07988 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SFTPBP07988 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SFTPBP07988 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SFTPBP07988 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SFTPBP07988 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SFTPBP07988 RARRES2P2-201ENST00000394842 485 ntBASIC20.59■□□□□ 0.89
SFTPBP07988 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SFTPBP07988 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SFTPBP07988 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.59■□□□□ 0.89
SFTPBP07988 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.59■□□□□ 0.89
SFTPBP07988 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SFTPBP07988 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SFTPBP07988 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.58■□□□□ 0.89
SFTPBP07988 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SFTPBP07988 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SFTPBP07988 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SFTPBP07988 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SFTPBP07988 RNF126P1-201ENST00000567452 1320 ntBASIC20.57■□□□□ 0.88
SFTPBP07988 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SFTPBP07988 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SFTPBP07988 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SFTPBP07988 AC060814.1-201ENST00000554326 538 ntBASIC20.57■□□□□ 0.88
SFTPBP07988 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SFTPBP07988 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SFTPBP07988 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SFTPBP07988 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.56■□□□□ 0.88
SFTPBP07988 AC126177.7-201ENST00000547904 679 ntBASIC20.56■□□□□ 0.88
SFTPBP07988 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SFTPBP07988 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SFTPBP07988 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SFTPBP07988 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SFTPBP07988 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SFTPBP07988 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.56■□□□□ 0.88
SFTPBP07988 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.55■□□□□ 0.88
SFTPBP07988 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.55■□□□□ 0.88
SFTPBP07988 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SFTPBP07988 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SFTPBP07988 AC096887.2-201ENST00000623443 1957 ntBASIC20.55■□□□□ 0.88
SFTPBP07988 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SFTPBP07988 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.55■□□□□ 0.88
SFTPBP07988 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms