Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
HLA-AP01891 LINC01124-201ENST00000409786 2117 ntBASIC20.15■□□□□ 0.82
HLA-AP01891 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-AP01891 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-AP01891 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-AP01891 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-AP01891 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
HLA-AP01891 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-AP01891 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
HLA-AP01891 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HLA-AP01891 MIR6090-201ENST00000622481 60 ntBASIC20.13■□□□□ 0.81
HLA-AP01891 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-AP01891 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-AP01891 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
HLA-AP01891 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-AP01891 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-AP01891 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-AP01891 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-AP01891 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.12■□□□□ 0.81
HLA-AP01891 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-AP01891 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
HLA-AP01891 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-AP01891 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
HLA-AP01891 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
HLA-AP01891 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.11■□□□□ 0.81
HLA-AP01891 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-AP01891 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-AP01891 AC108673.1-201ENST00000510422 1159 ntBASIC20.11■□□□□ 0.81
HLA-AP01891 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-AP01891 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-AP01891 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-AP01891 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
HLA-AP01891 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.11■□□□□ 0.81
HLA-AP01891 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-AP01891 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-AP01891 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-AP01891 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.1■□□□□ 0.81
HLA-AP01891 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-AP01891 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
HLA-AP01891 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-AP01891 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-AP01891 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-AP01891 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HLA-AP01891 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-AP01891 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-AP01891 AC044849.2-201ENST00000606596 710 ntBASIC20.09■□□□□ 0.81
HLA-AP01891 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.08■□□□□ 0.81
HLA-AP01891 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-AP01891 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-AP01891 AC096887.2-201ENST00000623443 1957 ntBASIC20.08■□□□□ 0.8
HLA-AP01891 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-AP01891 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.08■□□□□ 0.8
HLA-AP01891 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-AP01891 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
HLA-AP01891 AC097639.1-201ENST00000565519 1891 ntBASIC20.07■□□□□ 0.8
HLA-AP01891 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.07■□□□□ 0.8
HLA-AP01891 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-AP01891 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-AP01891 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.07■□□□□ 0.8
HLA-AP01891 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-AP01891 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.07■□□□□ 0.8
HLA-AP01891 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
HLA-AP01891 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-AP01891 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-AP01891 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-AP01891 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.06■□□□□ 0.8
HLA-AP01891 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
HLA-AP01891 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-AP01891 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-AP01891 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.05■□□□□ 0.8
HLA-AP01891 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-AP01891 AC079834.2-201ENST00000609776 1949 ntBASIC20.05■□□□□ 0.8
HLA-AP01891 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-AP01891 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-AP01891 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-AP01891 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-AP01891 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.04■□□□□ 0.8
HLA-AP01891 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.04■□□□□ 0.8
HLA-AP01891 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-AP01891 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-AP01891 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-AP01891 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-AP01891 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-AP01891 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-AP01891 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-AP01891 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-AP01891 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.03■□□□□ 0.8
HLA-AP01891 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-AP01891 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HLA-AP01891 AP003733.4-201ENST00000623785 1697 ntBASIC20.03■□□□□ 0.8
HLA-AP01891 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
HLA-AP01891 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.02■□□□□ 0.8
HLA-AP01891 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.02■□□□□ 0.8
HLA-AP01891 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HLA-AP01891 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-AP01891 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.02■□□□□ 0.8
HLA-AP01891 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HLA-AP01891 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-AP01891 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-AP01891 AC110285.7-201ENST00000624417 1536 ntBASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms