Protein–RNA interactions for Protein: P00403

MT-CO2, Cytochrome c oxidase subunit 2, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO2P00403 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO2P00403 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.21■□□□□ 0.67
MT-CO2P00403 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.21■□□□□ 0.67
MT-CO2P00403 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO2P00403 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MT-CO2P00403 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO2P00403 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO2P00403 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO2P00403 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-CO2P00403 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-CO2P00403 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.2■□□□□ 0.66
MT-CO2P00403 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO2P00403 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO2P00403 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO2P00403 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO2P00403 ABHD17AP4-201ENST00000411545 909 ntBASIC19.19■□□□□ 0.66
MT-CO2P00403 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO2P00403 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.19■□□□□ 0.66
MT-CO2P00403 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO2P00403 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-CO2P00403 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO2P00403 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO2P00403 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO2P00403 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-CO2P00403 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO2P00403 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO2P00403 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO2P00403 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO2P00403 CR559946.2-201ENST00000623684 991 ntBASIC19.17■□□□□ 0.66
MT-CO2P00403 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.17■□□□□ 0.66
MT-CO2P00403 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-CO2P00403 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MT-CO2P00403 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MT-CO2P00403 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.16■□□□□ 0.66
MT-CO2P00403 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO2P00403 AL359258.2-201ENST00000564063 1566 ntBASIC19.16■□□□□ 0.66
MT-CO2P00403 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.16■□□□□ 0.66
MT-CO2P00403 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.16■□□□□ 0.66
MT-CO2P00403 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO2P00403 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
MT-CO2P00403 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO2P00403 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.16■□□□□ 0.66
MT-CO2P00403 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-CO2P00403 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO2P00403 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO2P00403 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO2P00403 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
MT-CO2P00403 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO2P00403 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO2P00403 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO2P00403 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO2P00403 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO2P00403 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-CO2P00403 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.14■□□□□ 0.65
MT-CO2P00403 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-CO2P00403 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
MT-CO2P00403 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.14■□□□□ 0.65
MT-CO2P00403 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-CO2P00403 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-CO2P00403 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
MT-CO2P00403 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-CO2P00403 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.13■□□□□ 0.65
MT-CO2P00403 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-CO2P00403 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
MT-CO2P00403 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.13■□□□□ 0.65
MT-CO2P00403 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-CO2P00403 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-CO2P00403 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-CO2P00403 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MT-CO2P00403 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.12■□□□□ 0.65
MT-CO2P00403 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.12■□□□□ 0.65
MT-CO2P00403 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
MT-CO2P00403 ERN1-208ENST00000606895 2068 ntBASIC19.12■□□□□ 0.65
MT-CO2P00403 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MT-CO2P00403 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-CO2P00403 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-CO2P00403 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-CO2P00403 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MT-CO2P00403 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
MT-CO2P00403 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-CO2P00403 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-CO2P00403 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MT-CO2P00403 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MT-CO2P00403 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.11■□□□□ 0.65
MT-CO2P00403 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
MT-CO2P00403 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MT-CO2P00403 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MT-CO2P00403 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO2P00403 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO2P00403 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO2P00403 AC010501.1-201ENST00000606270 1962 ntBASIC19.1■□□□□ 0.65
MT-CO2P00403 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO2P00403 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO2P00403 MIR3648-2-201ENST00000581792 180 ntBASIC19.1■□□□□ 0.65
MT-CO2P00403 MIR3648-1-201ENST00000615959 180 ntBASIC19.1■□□□□ 0.65
MT-CO2P00403 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO2P00403 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO2P00403 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MT-CO2P00403 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.09■□□□□ 0.65
MT-CO2P00403 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms