Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00862A6NCI5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00862A6NCI5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00862A6NCI5 AC018358.1-201ENST00000631079 1402 ntBASIC19.76■□□□□ 0.75
LINC00862A6NCI5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.76■□□□□ 0.75
LINC00862A6NCI5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.75■□□□□ 0.75
LINC00862A6NCI5 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.75■□□□□ 0.75
LINC00862A6NCI5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00862A6NCI5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00862A6NCI5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00862A6NCI5 AC010501.1-201ENST00000606270 1962 ntBASIC19.74■□□□□ 0.75
LINC00862A6NCI5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00862A6NCI5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
LINC00862A6NCI5 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00862A6NCI5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00862A6NCI5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00862A6NCI5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.74■□□□□ 0.75
LINC00862A6NCI5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00862A6NCI5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LINC00862A6NCI5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LINC00862A6NCI5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00862A6NCI5 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00862A6NCI5 AC015813.7-201ENST00000623294 581 ntBASIC19.73■□□□□ 0.75
LINC00862A6NCI5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00862A6NCI5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.73■□□□□ 0.75
LINC00862A6NCI5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00862A6NCI5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00862A6NCI5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.72■□□□□ 0.75
LINC00862A6NCI5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00862A6NCI5 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.72■□□□□ 0.75
LINC00862A6NCI5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.72■□□□□ 0.75
LINC00862A6NCI5 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC00862A6NCI5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.71■□□□□ 0.75
LINC00862A6NCI5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC00862A6NCI5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LINC00862A6NCI5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC00862A6NCI5 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LINC00862A6NCI5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC00862A6NCI5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC00862A6NCI5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC00862A6NCI5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC00862A6NCI5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC00862A6NCI5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LINC00862A6NCI5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LINC00862A6NCI5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC00862A6NCI5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LINC00862A6NCI5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.7■□□□□ 0.74
LINC00862A6NCI5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.7■□□□□ 0.74
LINC00862A6NCI5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LINC00862A6NCI5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.7■□□□□ 0.74
LINC00862A6NCI5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00862A6NCI5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00862A6NCI5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00862A6NCI5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LINC00862A6NCI5 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00862A6NCI5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00862A6NCI5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00862A6NCI5 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00862A6NCI5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00862A6NCI5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.68■□□□□ 0.74
LINC00862A6NCI5 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC00862A6NCI5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LINC00862A6NCI5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC00862A6NCI5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LINC00862A6NCI5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC00862A6NCI5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.68■□□□□ 0.74
LINC00862A6NCI5 AC007375.3-201ENST00000600936 2314 ntBASIC19.68■□□□□ 0.74
LINC00862A6NCI5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00862A6NCI5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LINC00862A6NCI5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.67■□□□□ 0.74
LINC00862A6NCI5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00862A6NCI5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.67■□□□□ 0.74
LINC00862A6NCI5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00862A6NCI5 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00862A6NCI5 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00862A6NCI5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00862A6NCI5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00862A6NCI5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC00862A6NCI5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
LINC00862A6NCI5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LINC00862A6NCI5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC00862A6NCI5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LINC00862A6NCI5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC00862A6NCI5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC00862A6NCI5 AC233723.2-201ENST00000623798 2106 ntBASIC19.65■□□□□ 0.74
LINC00862A6NCI5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC00862A6NCI5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC00862A6NCI5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.64■□□□□ 0.74
LINC00862A6NCI5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LINC00862A6NCI5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00862A6NCI5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00862A6NCI5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LINC00862A6NCI5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00862A6NCI5 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.64■□□□□ 0.73
LINC00862A6NCI5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00862A6NCI5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00862A6NCI5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.63■□□□□ 0.73
LINC00862A6NCI5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00862A6NCI5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
LINC00862A6NCI5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms