Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SSC5DA1L4H1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SSC5DA1L4H1 AC137630.3-201ENST00000607245 391 ntBASIC28.62■■■□□ 2.17
SSC5DA1L4H1 AC131281.2-201ENST00000520478 145 ntBASIC28.62■■■□□ 2.17
SSC5DA1L4H1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SSC5DA1L4H1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC28.61■■■□□ 2.17
SSC5DA1L4H1 AC021242.3-201ENST00000607598 1377 ntBASIC28.61■■■□□ 2.17
SSC5DA1L4H1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SSC5DA1L4H1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC28.6■■■□□ 2.17
SSC5DA1L4H1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC28.6■■■□□ 2.17
SSC5DA1L4H1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SSC5DA1L4H1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.6■■■□□ 2.17
SSC5DA1L4H1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
SSC5DA1L4H1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SSC5DA1L4H1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC28.59■■■□□ 2.17
SSC5DA1L4H1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC28.59■■■□□ 2.17
SSC5DA1L4H1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SSC5DA1L4H1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SSC5DA1L4H1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.59■■■□□ 2.17
SSC5DA1L4H1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SSC5DA1L4H1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SSC5DA1L4H1 TSPY9P-201ENST00000440215 945 ntBASIC28.58■■■□□ 2.17
SSC5DA1L4H1 TSPY11P-201ENST00000442607 1045 ntBASIC28.58■■■□□ 2.17
SSC5DA1L4H1 AC120024.1-201ENST00000562672 995 ntBASIC28.58■■■□□ 2.17
SSC5DA1L4H1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC28.58■■■□□ 2.17
SSC5DA1L4H1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC28.58■■■□□ 2.17
SSC5DA1L4H1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC28.58■■■□□ 2.17
SSC5DA1L4H1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SSC5DA1L4H1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.57■■■□□ 2.16
SSC5DA1L4H1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC28.57■■■□□ 2.16
SSC5DA1L4H1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC28.57■■■□□ 2.16
SSC5DA1L4H1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC28.57■■■□□ 2.16
SSC5DA1L4H1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
SSC5DA1L4H1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
SSC5DA1L4H1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SSC5DA1L4H1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC28.56■■■□□ 2.16
SSC5DA1L4H1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SSC5DA1L4H1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SSC5DA1L4H1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC28.55■■■□□ 2.16
SSC5DA1L4H1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC28.55■■■□□ 2.16
SSC5DA1L4H1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SSC5DA1L4H1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SSC5DA1L4H1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC28.54■■■□□ 2.16
SSC5DA1L4H1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SSC5DA1L4H1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC28.54■■■□□ 2.16
SSC5DA1L4H1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC28.54■■■□□ 2.16
SSC5DA1L4H1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SSC5DA1L4H1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SSC5DA1L4H1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC28.53■■■□□ 2.16
SSC5DA1L4H1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.53■■■□□ 2.16
SSC5DA1L4H1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
SSC5DA1L4H1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SSC5DA1L4H1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC28.53■■■□□ 2.16
SSC5DA1L4H1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
SSC5DA1L4H1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC28.52■■■□□ 2.16
SSC5DA1L4H1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SSC5DA1L4H1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SSC5DA1L4H1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
SSC5DA1L4H1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC28.51■■■□□ 2.15
SSC5DA1L4H1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SSC5DA1L4H1 KRT18P10-201ENST00000388836 1287 ntBASIC28.51■■■□□ 2.15
SSC5DA1L4H1 MIR4281-201ENST00000580852 62 ntBASIC28.51■■■□□ 2.15
SSC5DA1L4H1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC28.51■■■□□ 2.15
SSC5DA1L4H1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SSC5DA1L4H1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SSC5DA1L4H1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SSC5DA1L4H1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
SSC5DA1L4H1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.5■■■□□ 2.15
SSC5DA1L4H1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC28.5■■■□□ 2.15
SSC5DA1L4H1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
SSC5DA1L4H1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SSC5DA1L4H1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC28.5■■■□□ 2.15
SSC5DA1L4H1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
SSC5DA1L4H1 DRD5P2-201ENST00000421395 2012 ntBASIC28.49■■■□□ 2.15
SSC5DA1L4H1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SSC5DA1L4H1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
SSC5DA1L4H1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SSC5DA1L4H1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SSC5DA1L4H1 RALB-208ENST00000631312 311 ntTSL 5 BASIC28.48■■■□□ 2.15
SSC5DA1L4H1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
SSC5DA1L4H1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SSC5DA1L4H1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC28.47■■■□□ 2.15
SSC5DA1L4H1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC28.47■■■□□ 2.15
SSC5DA1L4H1 AL139246.5-201ENST00000606645 996 ntBASIC28.47■■■□□ 2.15
SSC5DA1L4H1 AC092028.1-203ENST00000608262 953 ntBASIC28.47■■■□□ 2.15
SSC5DA1L4H1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
SSC5DA1L4H1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SSC5DA1L4H1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.46■■■□□ 2.15
SSC5DA1L4H1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
SSC5DA1L4H1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC28.45■■■□□ 2.15
SSC5DA1L4H1 AL117332.1-201ENST00000622628 974 ntBASIC28.45■■■□□ 2.15
SSC5DA1L4H1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
SSC5DA1L4H1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC28.45■■■□□ 2.14
SSC5DA1L4H1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC28.45■■■□□ 2.14
SSC5DA1L4H1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC28.45■■■□□ 2.14
SSC5DA1L4H1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC28.45■■■□□ 2.14
SSC5DA1L4H1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
SSC5DA1L4H1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC28.45■■■□□ 2.14
SSC5DA1L4H1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
SSC5DA1L4H1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms