Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV22A0A0B4J277 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRAV22A0A0B4J277 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV22A0A0B4J277 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
TRAV22A0A0B4J277 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV22A0A0B4J277 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV22A0A0B4J277 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAV22A0A0B4J277 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRAV22A0A0B4J277 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV22A0A0B4J277 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV22A0A0B4J277 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV22A0A0B4J277 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV22A0A0B4J277 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRAV22A0A0B4J277 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRAV22A0A0B4J277 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV22A0A0B4J277 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
TRAV22A0A0B4J277 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV22A0A0B4J277 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV22A0A0B4J277 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TRAV22A0A0B4J277 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV22A0A0B4J277 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV22A0A0B4J277 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRAV22A0A0B4J277 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV22A0A0B4J277 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV22A0A0B4J277 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV22A0A0B4J277 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV22A0A0B4J277 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV22A0A0B4J277 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV22A0A0B4J277 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAV22A0A0B4J277 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV22A0A0B4J277 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV22A0A0B4J277 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV22A0A0B4J277 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV22A0A0B4J277 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRAV22A0A0B4J277 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRAV22A0A0B4J277 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV22A0A0B4J277 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
TRAV22A0A0B4J277 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV22A0A0B4J277 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV22A0A0B4J277 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV22A0A0B4J277 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV22A0A0B4J277 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRAV22A0A0B4J277 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV22A0A0B4J277 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV22A0A0B4J277 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
TRAV22A0A0B4J277 AC138932.3-201ENST00000567634 1902 ntBASIC13.58□□□□□ -0.24
TRAV22A0A0B4J277 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 WHAMMP3-201ENST00000611636 1609 ntBASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 AC022211.4-201ENST00000625094 2161 ntBASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TRAV22A0A0B4J277 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV22A0A0B4J277 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV22A0A0B4J277 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV22A0A0B4J277 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV22A0A0B4J277 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV22A0A0B4J277 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV22A0A0B4J277 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV22A0A0B4J277 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV22A0A0B4J277 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV22A0A0B4J277 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV22A0A0B4J277 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV22A0A0B4J277 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV22A0A0B4J277 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV22A0A0B4J277 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV22A0A0B4J277 C9orf163-202ENST00000624034 2573 ntBASIC13.54□□□□□ -0.24
TRAV22A0A0B4J277 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV22A0A0B4J277 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TRAV22A0A0B4J277 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV22A0A0B4J277 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV22A0A0B4J277 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TRAV22A0A0B4J277 DUSP8P5-201ENST00000422884 1815 ntBASIC13.54□□□□□ -0.24
TRAV22A0A0B4J277 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV22A0A0B4J277 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV22A0A0B4J277 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV22A0A0B4J277 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV22A0A0B4J277 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV22A0A0B4J277 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TRAV22A0A0B4J277 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV22A0A0B4J277 AC097639.1-201ENST00000565519 1891 ntBASIC13.53□□□□□ -0.24
TRAV22A0A0B4J277 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV22A0A0B4J277 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
TRAV22A0A0B4J277 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TRAV22A0A0B4J277 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV22A0A0B4J277 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV22A0A0B4J277 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV22A0A0B4J277 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV22A0A0B4J277 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms