Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C12orf4Q9NQ89 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 AC012676.1-201ENST00000574705 1949 ntBASIC20.7■□□□□ 0.91
C12orf4Q9NQ89 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
C12orf4Q9NQ89 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C12orf4Q9NQ89 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C12orf4Q9NQ89 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C12orf4Q9NQ89 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C12orf4Q9NQ89 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C12orf4Q9NQ89 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.7■□□□□ 0.9
C12orf4Q9NQ89 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 AC079834.2-201ENST00000609776 1949 ntBASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.67■□□□□ 0.9
C12orf4Q9NQ89 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
C12orf4Q9NQ89 AC021231.2-201ENST00000594613 730 ntBASIC20.67■□□□□ 0.9
C12orf4Q9NQ89 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
C12orf4Q9NQ89 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C12orf4Q9NQ89 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.66■□□□□ 0.9
C12orf4Q9NQ89 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf4Q9NQ89 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf4Q9NQ89 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf4Q9NQ89 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf4Q9NQ89 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf4Q9NQ89 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf4Q9NQ89 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf4Q9NQ89 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 DUX4L29-201ENST00000425409 679 ntBASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
C12orf4Q9NQ89 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.64■□□□□ 0.9
C12orf4Q9NQ89 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
C12orf4Q9NQ89 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf4Q9NQ89 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf4Q9NQ89 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf4Q9NQ89 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf4Q9NQ89 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf4Q9NQ89 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.62■□□□□ 0.89
C12orf4Q9NQ89 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
C12orf4Q9NQ89 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
C12orf4Q9NQ89 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.62■□□□□ 0.89
C12orf4Q9NQ89 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf4Q9NQ89 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf4Q9NQ89 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
C12orf4Q9NQ89 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf4Q9NQ89 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
C12orf4Q9NQ89 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.61■□□□□ 0.89
C12orf4Q9NQ89 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C12orf4Q9NQ89 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
C12orf4Q9NQ89 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.6■□□□□ 0.89
C12orf4Q9NQ89 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
C12orf4Q9NQ89 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
C12orf4Q9NQ89 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.6■□□□□ 0.89
C12orf4Q9NQ89 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
C12orf4Q9NQ89 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
C12orf4Q9NQ89 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
C12orf4Q9NQ89 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms