Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
PCDH11XQ9BZA7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
PCDH11XQ9BZA7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
PCDH11XQ9BZA7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
PCDH11XQ9BZA7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PCDH11XQ9BZA7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.96■■■□□ 2.71
PCDH11XQ9BZA7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
PCDH11XQ9BZA7 AL449106.1-201ENST00000608517 1980 ntBASIC31.96■■■□□ 2.71
PCDH11XQ9BZA7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PCDH11XQ9BZA7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
PCDH11XQ9BZA7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.7
PCDH11XQ9BZA7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.95■■■□□ 2.7
PCDH11XQ9BZA7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.95■■■□□ 2.7
PCDH11XQ9BZA7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.95■■■□□ 2.7
PCDH11XQ9BZA7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
PCDH11XQ9BZA7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PCDH11XQ9BZA7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PCDH11XQ9BZA7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
PCDH11XQ9BZA7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
PCDH11XQ9BZA7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
PCDH11XQ9BZA7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.93■■■□□ 2.7
PCDH11XQ9BZA7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
PCDH11XQ9BZA7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PCDH11XQ9BZA7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.92■■■□□ 2.7
PCDH11XQ9BZA7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.92■■■□□ 2.7
PCDH11XQ9BZA7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PCDH11XQ9BZA7 KRT18P10-201ENST00000388836 1287 ntBASIC31.91■■■□□ 2.7
PCDH11XQ9BZA7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.91■■■□□ 2.7
PCDH11XQ9BZA7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
PCDH11XQ9BZA7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
PCDH11XQ9BZA7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PCDH11XQ9BZA7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PCDH11XQ9BZA7 AC022616.5-201ENST00000518796 181 ntBASIC31.9■■■□□ 2.7
PCDH11XQ9BZA7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PCDH11XQ9BZA7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PCDH11XQ9BZA7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PCDH11XQ9BZA7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PCDH11XQ9BZA7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
PCDH11XQ9BZA7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PCDH11XQ9BZA7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.89■■■□□ 2.7
PCDH11XQ9BZA7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
PCDH11XQ9BZA7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.7
PCDH11XQ9BZA7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
PCDH11XQ9BZA7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
PCDH11XQ9BZA7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.87■■■□□ 2.69
PCDH11XQ9BZA7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PCDH11XQ9BZA7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PCDH11XQ9BZA7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
PCDH11XQ9BZA7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
PCDH11XQ9BZA7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
PCDH11XQ9BZA7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.86■■■□□ 2.69
PCDH11XQ9BZA7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.86■■■□□ 2.69
PCDH11XQ9BZA7 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.86■■■□□ 2.69
PCDH11XQ9BZA7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.86■■■□□ 2.69
PCDH11XQ9BZA7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC31.85■■■□□ 2.69
PCDH11XQ9BZA7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.85■■■□□ 2.69
PCDH11XQ9BZA7 DRD5P2-201ENST00000421395 2012 ntBASIC31.85■■■□□ 2.69
PCDH11XQ9BZA7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.84■■■□□ 2.69
PCDH11XQ9BZA7 KRT125P-201ENST00000546827 989 ntBASIC31.84■■■□□ 2.69
PCDH11XQ9BZA7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PCDH11XQ9BZA7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
PCDH11XQ9BZA7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PCDH11XQ9BZA7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PCDH11XQ9BZA7 BX664725.1-201ENST00000438252 379 ntBASIC31.83■■■□□ 2.69
PCDH11XQ9BZA7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PCDH11XQ9BZA7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.82■■■□□ 2.69
PCDH11XQ9BZA7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.82■■■□□ 2.69
PCDH11XQ9BZA7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
PCDH11XQ9BZA7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
PCDH11XQ9BZA7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
PCDH11XQ9BZA7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.82■■■□□ 2.68
PCDH11XQ9BZA7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.82■■■□□ 2.68
PCDH11XQ9BZA7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
PCDH11XQ9BZA7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
PCDH11XQ9BZA7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.81■■■□□ 2.68
PCDH11XQ9BZA7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
PCDH11XQ9BZA7 MIR4787-201ENST00000607364 84 ntBASIC31.81■■■□□ 2.68
PCDH11XQ9BZA7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.81■■■□□ 2.68
PCDH11XQ9BZA7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.81■■■□□ 2.68
PCDH11XQ9BZA7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PCDH11XQ9BZA7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
PCDH11XQ9BZA7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PCDH11XQ9BZA7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.8■■■□□ 2.68
PCDH11XQ9BZA7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.79■■■□□ 2.68
PCDH11XQ9BZA7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PCDH11XQ9BZA7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.79■■■□□ 2.68
PCDH11XQ9BZA7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.79■■■□□ 2.68
PCDH11XQ9BZA7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
PCDH11XQ9BZA7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PCDH11XQ9BZA7 LINC01003-201ENST00000564834 1764 ntBASIC31.77■■■□□ 2.68
PCDH11XQ9BZA7 KRT18P24-201ENST00000344739 1156 ntBASIC31.77■■■□□ 2.68
PCDH11XQ9BZA7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PCDH11XQ9BZA7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC31.77■■■□□ 2.68
PCDH11XQ9BZA7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.77■■■□□ 2.68
PCDH11XQ9BZA7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PCDH11XQ9BZA7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
PCDH11XQ9BZA7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
PCDH11XQ9BZA7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.76■■■□□ 2.68
PCDH11XQ9BZA7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PCDH11XQ9BZA7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms