Protein–RNA interactions for Protein: Q96JE7

SEC16B, Protein transport protein Sec16B, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16BQ96JE7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SEC16BQ96JE7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SEC16BQ96JE7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
SEC16BQ96JE7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SEC16BQ96JE7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SEC16BQ96JE7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
SEC16BQ96JE7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.42■■□□□ 1.5
SEC16BQ96JE7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.41■■□□□ 1.5
SEC16BQ96JE7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.41■■□□□ 1.5
SEC16BQ96JE7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SEC16BQ96JE7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.4■■□□□ 1.5
SEC16BQ96JE7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SEC16BQ96JE7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.4■■□□□ 1.5
SEC16BQ96JE7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.4■■□□□ 1.5
SEC16BQ96JE7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SEC16BQ96JE7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
SEC16BQ96JE7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SEC16BQ96JE7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.39■■□□□ 1.49
SEC16BQ96JE7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.39■■□□□ 1.49
SEC16BQ96JE7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
SEC16BQ96JE7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
SEC16BQ96JE7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SEC16BQ96JE7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SEC16BQ96JE7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.38■■□□□ 1.49
SEC16BQ96JE7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SEC16BQ96JE7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.37■■□□□ 1.49
SEC16BQ96JE7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SEC16BQ96JE7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SEC16BQ96JE7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SEC16BQ96JE7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SEC16BQ96JE7 AC022211.4-201ENST00000625094 2161 ntBASIC24.36■■□□□ 1.49
SEC16BQ96JE7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SEC16BQ96JE7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SEC16BQ96JE7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.36■■□□□ 1.49
SEC16BQ96JE7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
SEC16BQ96JE7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SEC16BQ96JE7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.36■■□□□ 1.49
SEC16BQ96JE7 AC068473.5-201ENST00000616428 2072 ntBASIC24.35■■□□□ 1.49
SEC16BQ96JE7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SEC16BQ96JE7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SEC16BQ96JE7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
SEC16BQ96JE7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SEC16BQ96JE7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SEC16BQ96JE7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SEC16BQ96JE7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.34■■□□□ 1.49
SEC16BQ96JE7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SEC16BQ96JE7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.34■■□□□ 1.49
SEC16BQ96JE7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SEC16BQ96JE7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.33■■□□□ 1.49
SEC16BQ96JE7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SEC16BQ96JE7 ABHD17AP4-201ENST00000411545 909 ntBASIC24.33■■□□□ 1.49
SEC16BQ96JE7 ZNRF2P2-203ENST00000454624 420 ntBASIC24.33■■□□□ 1.49
SEC16BQ96JE7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SEC16BQ96JE7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
SEC16BQ96JE7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SEC16BQ96JE7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SEC16BQ96JE7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.31■■□□□ 1.48
SEC16BQ96JE7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SEC16BQ96JE7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
SEC16BQ96JE7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SEC16BQ96JE7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SEC16BQ96JE7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SEC16BQ96JE7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SEC16BQ96JE7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SEC16BQ96JE7 AC010501.1-201ENST00000606270 1962 ntBASIC24.29■■□□□ 1.48
SEC16BQ96JE7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SEC16BQ96JE7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.29■■□□□ 1.48
SEC16BQ96JE7 MIR7108-201ENST00000614319 87 ntBASIC24.29■■□□□ 1.48
SEC16BQ96JE7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SEC16BQ96JE7 AC079834.2-201ENST00000609776 1949 ntBASIC24.29■■□□□ 1.48
SEC16BQ96JE7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.29■■□□□ 1.48
SEC16BQ96JE7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SEC16BQ96JE7 LINC00543-201ENST00000567234 1845 ntBASIC24.28■■□□□ 1.48
SEC16BQ96JE7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.28■■□□□ 1.48
SEC16BQ96JE7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SEC16BQ96JE7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SEC16BQ96JE7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.28■■□□□ 1.48
SEC16BQ96JE7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SEC16BQ96JE7 AC142472.1-201ENST00000612013 1741 ntBASIC24.27■■□□□ 1.48
SEC16BQ96JE7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.27■■□□□ 1.48
SEC16BQ96JE7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SEC16BQ96JE7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SEC16BQ96JE7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.27■■□□□ 1.48
SEC16BQ96JE7 DUX4L13-201ENST00000554103 1267 ntBASIC24.27■■□□□ 1.48
SEC16BQ96JE7 DUX4L15-201ENST00000611059 1267 ntBASIC24.27■■□□□ 1.48
SEC16BQ96JE7 DUX4L23-201ENST00000615195 1269 ntBASIC24.27■■□□□ 1.48
SEC16BQ96JE7 DUX4L24-201ENST00000617576 1269 ntBASIC24.27■■□□□ 1.48
SEC16BQ96JE7 DUX4L22-201ENST00000618238 1269 ntBASIC24.27■■□□□ 1.48
SEC16BQ96JE7 DUX4L20-201ENST00000619712 1269 ntBASIC24.27■■□□□ 1.48
SEC16BQ96JE7 DUX4L21-201ENST00000622058 1269 ntBASIC24.27■■□□□ 1.48
SEC16BQ96JE7 DUX4L10-201ENST00000622460 1267 ntBASIC24.27■■□□□ 1.48
SEC16BQ96JE7 DUX4L25-201ENST00000624915 1269 ntBASIC24.27■■□□□ 1.48
SEC16BQ96JE7 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.27■■□□□ 1.48
SEC16BQ96JE7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SEC16BQ96JE7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SEC16BQ96JE7 DUX4L11-201ENST00000611504 1267 ntBASIC24.26■■□□□ 1.47
SEC16BQ96JE7 DUX4L12-201ENST00000614593 1267 ntBASIC24.26■■□□□ 1.47
SEC16BQ96JE7 DUX4L14-201ENST00000621227 1267 ntBASIC24.26■■□□□ 1.47
SEC16BQ96JE7 AC110285.7-201ENST00000624417 1536 ntBASIC24.25■■□□□ 1.47
SEC16BQ96JE7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms