Protein–RNA interactions for Protein: Q96A46

SLC25A28, Mitoferrin-2, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A28Q96A46 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC25A28Q96A46 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC25A28Q96A46 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SLC25A28Q96A46 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC25A28Q96A46 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC25A28Q96A46 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC25A28Q96A46 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC25A28Q96A46 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC25A28Q96A46 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.94■□□□□ 0.94
SLC25A28Q96A46 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC25A28Q96A46 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC25A28Q96A46 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SLC25A28Q96A46 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC25A28Q96A46 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.93■□□□□ 0.94
SLC25A28Q96A46 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC25A28Q96A46 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC25A28Q96A46 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.92■□□□□ 0.94
SLC25A28Q96A46 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.92■□□□□ 0.94
SLC25A28Q96A46 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC25A28Q96A46 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC25A28Q96A46 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC25A28Q96A46 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC25A28Q96A46 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC25A28Q96A46 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC25A28Q96A46 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC25A28Q96A46 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC25A28Q96A46 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC25A28Q96A46 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SLC25A28Q96A46 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.91■□□□□ 0.94
SLC25A28Q96A46 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 AC022211.4-201ENST00000625094 2161 ntBASIC20.9■□□□□ 0.94
SLC25A28Q96A46 AC138932.3-201ENST00000567634 1902 ntBASIC20.9■□□□□ 0.94
SLC25A28Q96A46 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC25A28Q96A46 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC25A28Q96A46 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SLC25A28Q96A46 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.89■□□□□ 0.94
SLC25A28Q96A46 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC25A28Q96A46 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC25A28Q96A46 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
SLC25A28Q96A46 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC25A28Q96A46 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC25A28Q96A46 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SLC25A28Q96A46 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC25A28Q96A46 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC25A28Q96A46 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC25A28Q96A46 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SLC25A28Q96A46 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC25A28Q96A46 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC25A28Q96A46 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC25A28Q96A46 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC25A28Q96A46 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC25A28Q96A46 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC25A28Q96A46 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC25A28Q96A46 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SLC25A28Q96A46 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC25A28Q96A46 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC25A28Q96A46 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SLC25A28Q96A46 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC25A28Q96A46 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC25A28Q96A46 AL139125.2-201ENST00000623134 1869 ntBASIC20.87■□□□□ 0.93
SLC25A28Q96A46 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC25A28Q96A46 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC25A28Q96A46 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC25A28Q96A46 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC25A28Q96A46 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC25A28Q96A46 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC25A28Q96A46 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC25A28Q96A46 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC25A28Q96A46 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SLC25A28Q96A46 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC25A28Q96A46 AC096887.2-201ENST00000623443 1957 ntBASIC20.85■□□□□ 0.93
SLC25A28Q96A46 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC25A28Q96A46 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC25A28Q96A46 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC25A28Q96A46 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC25A28Q96A46 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC25A28Q96A46 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC25A28Q96A46 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC25A28Q96A46 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC25A28Q96A46 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC25A28Q96A46 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC25A28Q96A46 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC25A28Q96A46 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms