Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PTCD2Q8WV60 AC135731.1-201ENST00000569415 2548 ntBASIC24.5■■□□□ 1.51
PTCD2Q8WV60 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.5■■□□□ 1.51
PTCD2Q8WV60 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.5■■□□□ 1.51
PTCD2Q8WV60 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PTCD2Q8WV60 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PTCD2Q8WV60 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.5■■□□□ 1.51
PTCD2Q8WV60 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PTCD2Q8WV60 AC010501.1-201ENST00000606270 1962 ntBASIC24.49■■□□□ 1.51
PTCD2Q8WV60 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PTCD2Q8WV60 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PTCD2Q8WV60 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
PTCD2Q8WV60 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.48■■□□□ 1.51
PTCD2Q8WV60 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PTCD2Q8WV60 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
PTCD2Q8WV60 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PTCD2Q8WV60 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PTCD2Q8WV60 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PTCD2Q8WV60 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PTCD2Q8WV60 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.46■■□□□ 1.51
PTCD2Q8WV60 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PTCD2Q8WV60 U85056.1-201ENST00000616429 682 ntBASIC24.46■■□□□ 1.51
PTCD2Q8WV60 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PTCD2Q8WV60 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
PTCD2Q8WV60 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PTCD2Q8WV60 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.45■■□□□ 1.5
PTCD2Q8WV60 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PTCD2Q8WV60 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.45■■□□□ 1.5
PTCD2Q8WV60 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
PTCD2Q8WV60 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PTCD2Q8WV60 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.44■■□□□ 1.5
PTCD2Q8WV60 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PTCD2Q8WV60 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PTCD2Q8WV60 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PTCD2Q8WV60 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.43■■□□□ 1.5
PTCD2Q8WV60 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
PTCD2Q8WV60 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PTCD2Q8WV60 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PTCD2Q8WV60 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PTCD2Q8WV60 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
PTCD2Q8WV60 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PTCD2Q8WV60 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PTCD2Q8WV60 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.42■■□□□ 1.5
PTCD2Q8WV60 NTF6A-201ENST00000591175 560 ntBASIC24.42■■□□□ 1.5
PTCD2Q8WV60 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PTCD2Q8WV60 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PTCD2Q8WV60 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.41■■□□□ 1.5
PTCD2Q8WV60 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.41■■□□□ 1.5
PTCD2Q8WV60 ERN1-208ENST00000606895 2068 ntBASIC24.41■■□□□ 1.5
PTCD2Q8WV60 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
PTCD2Q8WV60 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PTCD2Q8WV60 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PTCD2Q8WV60 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.4■■□□□ 1.5
PTCD2Q8WV60 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PTCD2Q8WV60 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.39■■□□□ 1.5
PTCD2Q8WV60 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.39■■□□□ 1.5
PTCD2Q8WV60 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PTCD2Q8WV60 AC025884.2-201ENST00000553429 711 ntBASIC24.39■■□□□ 1.49
PTCD2Q8WV60 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.39■■□□□ 1.49
PTCD2Q8WV60 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PTCD2Q8WV60 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
PTCD2Q8WV60 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PTCD2Q8WV60 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PTCD2Q8WV60 SMPD5-203ENST00000639008 1464 ntBASIC24.38■■□□□ 1.49
PTCD2Q8WV60 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.38■■□□□ 1.49
PTCD2Q8WV60 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PTCD2Q8WV60 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PTCD2Q8WV60 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.38■■□□□ 1.49
PTCD2Q8WV60 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PTCD2Q8WV60 AC007029.1-201ENST00000604183 313 ntBASIC24.38■■□□□ 1.49
PTCD2Q8WV60 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PTCD2Q8WV60 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.37■■□□□ 1.49
PTCD2Q8WV60 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PTCD2Q8WV60 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PTCD2Q8WV60 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.36■■□□□ 1.49
PTCD2Q8WV60 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PTCD2Q8WV60 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
PTCD2Q8WV60 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PTCD2Q8WV60 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PTCD2Q8WV60 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.35■■□□□ 1.49
PTCD2Q8WV60 AC020928.2-201ENST00000588717 2197 ntBASIC24.35■■□□□ 1.49
PTCD2Q8WV60 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PTCD2Q8WV60 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
PTCD2Q8WV60 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.34■■□□□ 1.49
PTCD2Q8WV60 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PTCD2Q8WV60 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.34■■□□□ 1.49
PTCD2Q8WV60 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PTCD2Q8WV60 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PTCD2Q8WV60 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PTCD2Q8WV60 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PTCD2Q8WV60 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PTCD2Q8WV60 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
PTCD2Q8WV60 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.33■■□□□ 1.49
PTCD2Q8WV60 KRT18P60-201ENST00000312876 1297 ntBASIC24.33■■□□□ 1.49
PTCD2Q8WV60 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PTCD2Q8WV60 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTCD2Q8WV60 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PTCD2Q8WV60 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTCD2Q8WV60 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.32■■□□□ 1.48
PTCD2Q8WV60 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms