Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC34.9■■■■□ 3.18
LTBP4Q8N2S1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC34.89■■■■□ 3.18
LTBP4Q8N2S1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC34.88■■■■□ 3.17
LTBP4Q8N2S1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC34.88■■■■□ 3.17
LTBP4Q8N2S1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC34.88■■■■□ 3.17
LTBP4Q8N2S1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
LTBP4Q8N2S1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC34.87■■■■□ 3.17
LTBP4Q8N2S1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
LTBP4Q8N2S1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
LTBP4Q8N2S1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC34.86■■■■□ 3.17
LTBP4Q8N2S1 MIR6821-201ENST00000617625 74 ntBASIC34.86■■■■□ 3.17
LTBP4Q8N2S1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC34.86■■■■□ 3.17
LTBP4Q8N2S1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
LTBP4Q8N2S1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
LTBP4Q8N2S1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC34.85■■■■□ 3.17
LTBP4Q8N2S1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC34.85■■■■□ 3.17
LTBP4Q8N2S1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
LTBP4Q8N2S1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC34.84■■■■□ 3.17
LTBP4Q8N2S1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC34.83■■■■□ 3.17
LTBP4Q8N2S1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
LTBP4Q8N2S1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
LTBP4Q8N2S1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC34.83■■■■□ 3.17
LTBP4Q8N2S1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
LTBP4Q8N2S1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
LTBP4Q8N2S1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC34.82■■■■□ 3.16
LTBP4Q8N2S1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
LTBP4Q8N2S1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
LTBP4Q8N2S1 AL162430.1-201ENST00000480705 870 ntBASIC34.81■■■■□ 3.16
LTBP4Q8N2S1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC34.81■■■■□ 3.16
LTBP4Q8N2S1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
LTBP4Q8N2S1 RASSF1-AS1-201ENST00000629828 790 ntBASIC34.81■■■■□ 3.16
LTBP4Q8N2S1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
LTBP4Q8N2S1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC34.8■■■■□ 3.16
LTBP4Q8N2S1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC34.79■■■■□ 3.16
LTBP4Q8N2S1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC34.79■■■■□ 3.16
LTBP4Q8N2S1 AC090192.1-201ENST00000517740 490 ntBASIC34.79■■■■□ 3.16
LTBP4Q8N2S1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC34.79■■■■□ 3.16
LTBP4Q8N2S1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
LTBP4Q8N2S1 PBX2P1-201ENST00000493219 1291 ntBASIC34.78■■■■□ 3.16
LTBP4Q8N2S1 AC010997.5-201ENST00000609182 354 ntBASIC34.78■■■■□ 3.16
LTBP4Q8N2S1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC34.77■■■■□ 3.16
LTBP4Q8N2S1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC34.77■■■■□ 3.16
LTBP4Q8N2S1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC34.77■■■■□ 3.16
LTBP4Q8N2S1 AL356740.2-201ENST00000601559 647 ntBASIC34.77■■■■□ 3.16
LTBP4Q8N2S1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
LTBP4Q8N2S1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
LTBP4Q8N2S1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
LTBP4Q8N2S1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
LTBP4Q8N2S1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
LTBP4Q8N2S1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC34.75■■■■□ 3.15
LTBP4Q8N2S1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
LTBP4Q8N2S1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
LTBP4Q8N2S1 AL135925.1-201ENST00000605920 1701 ntBASIC34.74■■■■□ 3.15
LTBP4Q8N2S1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
LTBP4Q8N2S1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
LTBP4Q8N2S1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
LTBP4Q8N2S1 AC097381.1-201ENST00000429019 1296 ntBASIC34.73■■■■□ 3.15
LTBP4Q8N2S1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC34.73■■■■□ 3.15
LTBP4Q8N2S1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC34.73■■■■□ 3.15
LTBP4Q8N2S1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC34.73■■■■□ 3.15
LTBP4Q8N2S1 AL359504.2-201ENST00000605506 1601 ntBASIC34.73■■■■□ 3.15
LTBP4Q8N2S1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
LTBP4Q8N2S1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC34.73■■■■□ 3.15
LTBP4Q8N2S1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
LTBP4Q8N2S1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
LTBP4Q8N2S1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
LTBP4Q8N2S1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC34.72■■■■□ 3.15
LTBP4Q8N2S1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC34.72■■■■□ 3.15
LTBP4Q8N2S1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
LTBP4Q8N2S1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC34.71■■■■□ 3.15
LTBP4Q8N2S1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC34.71■■■■□ 3.15
LTBP4Q8N2S1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC34.7■■■■□ 3.15
LTBP4Q8N2S1 RARRES2P11-201ENST00000635158 484 ntBASIC34.7■■■■□ 3.15
LTBP4Q8N2S1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
LTBP4Q8N2S1 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC34.7■■■■□ 3.15
LTBP4Q8N2S1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC34.7■■■■□ 3.14
LTBP4Q8N2S1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
LTBP4Q8N2S1 AC105265.2-201ENST00000467189 838 ntBASIC34.69■■■■□ 3.14
LTBP4Q8N2S1 AC120024.1-201ENST00000562672 995 ntBASIC34.69■■■■□ 3.14
LTBP4Q8N2S1 AC087623.3-201ENST00000607047 1098 ntBASIC34.69■■■■□ 3.14
LTBP4Q8N2S1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
LTBP4Q8N2S1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC34.66■■■■□ 3.14
LTBP4Q8N2S1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC34.66■■■■□ 3.14
LTBP4Q8N2S1 MTDHP2-201ENST00000601468 714 ntBASIC34.66■■■■□ 3.14
LTBP4Q8N2S1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC34.66■■■■□ 3.14
LTBP4Q8N2S1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
LTBP4Q8N2S1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC34.66■■■■□ 3.14
LTBP4Q8N2S1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
LTBP4Q8N2S1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC34.66■■■■□ 3.14
LTBP4Q8N2S1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
LTBP4Q8N2S1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
LTBP4Q8N2S1 WHAMMP3-201ENST00000611636 1609 ntBASIC34.65■■■■□ 3.14
LTBP4Q8N2S1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC34.65■■■■□ 3.14
LTBP4Q8N2S1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
LTBP4Q8N2S1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC34.64■■■■□ 3.14
LTBP4Q8N2S1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC34.63■■■■□ 3.13
LTBP4Q8N2S1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC34.63■■■■□ 3.13
LTBP4Q8N2S1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC34.63■■■■□ 3.13
LTBP4Q8N2S1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC34.63■■■■□ 3.13
LTBP4Q8N2S1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms