Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC131281.2-201ENST00000520478 145 ntBASIC34.43■■■■□ 3.1
XRN1Q8IZH2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
XRN1Q8IZH2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC34.42■■■■□ 3.1
XRN1Q8IZH2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
XRN1Q8IZH2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC34.41■■■■□ 3.1
XRN1Q8IZH2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC34.41■■■■□ 3.1
XRN1Q8IZH2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
XRN1Q8IZH2 KRT125P-201ENST00000546827 989 ntBASIC34.41■■■■□ 3.1
XRN1Q8IZH2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
XRN1Q8IZH2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC34.4■■■■□ 3.1
XRN1Q8IZH2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC34.4■■■■□ 3.1
XRN1Q8IZH2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC34.4■■■■□ 3.1
XRN1Q8IZH2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC34.4■■■■□ 3.1
XRN1Q8IZH2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC34.4■■■■□ 3.1
XRN1Q8IZH2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC34.39■■■■□ 3.1
XRN1Q8IZH2 AC022616.5-201ENST00000518796 181 ntBASIC34.39■■■■□ 3.1
XRN1Q8IZH2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
XRN1Q8IZH2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
XRN1Q8IZH2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC34.38■■■■□ 3.09
XRN1Q8IZH2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
XRN1Q8IZH2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC34.38■■■■□ 3.09
XRN1Q8IZH2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
XRN1Q8IZH2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
XRN1Q8IZH2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
XRN1Q8IZH2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC34.37■■■■□ 3.09
XRN1Q8IZH2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC34.37■■■■□ 3.09
XRN1Q8IZH2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
XRN1Q8IZH2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
XRN1Q8IZH2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC34.35■■■■□ 3.09
XRN1Q8IZH2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC34.35■■■■□ 3.09
XRN1Q8IZH2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC34.34■■■■□ 3.09
XRN1Q8IZH2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC34.34■■■■□ 3.09
XRN1Q8IZH2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC34.34■■■■□ 3.09
XRN1Q8IZH2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC34.33■■■■□ 3.09
XRN1Q8IZH2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC34.33■■■■□ 3.09
XRN1Q8IZH2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC34.33■■■■□ 3.09
XRN1Q8IZH2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC34.33■■■■□ 3.09
XRN1Q8IZH2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
XRN1Q8IZH2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC34.32■■■■□ 3.08
XRN1Q8IZH2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
XRN1Q8IZH2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
XRN1Q8IZH2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC34.31■■■■□ 3.08
XRN1Q8IZH2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC34.3■■■■□ 3.08
XRN1Q8IZH2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
XRN1Q8IZH2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
XRN1Q8IZH2 AC137630.3-201ENST00000607245 391 ntBASIC34.3■■■■□ 3.08
XRN1Q8IZH2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
XRN1Q8IZH2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC34.29■■■■□ 3.08
XRN1Q8IZH2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC34.28■■■■□ 3.08
XRN1Q8IZH2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC34.28■■■■□ 3.08
XRN1Q8IZH2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC34.28■■■■□ 3.08
XRN1Q8IZH2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC34.28■■■■□ 3.08
XRN1Q8IZH2 AC021242.3-201ENST00000607598 1377 ntBASIC34.28■■■■□ 3.08
XRN1Q8IZH2 KRT18P24-201ENST00000344739 1156 ntBASIC34.27■■■■□ 3.08
XRN1Q8IZH2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
XRN1Q8IZH2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
XRN1Q8IZH2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC34.26■■■■□ 3.07
XRN1Q8IZH2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC34.26■■■■□ 3.07
XRN1Q8IZH2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC34.26■■■■□ 3.07
XRN1Q8IZH2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC34.24■■■■□ 3.07
XRN1Q8IZH2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
XRN1Q8IZH2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
XRN1Q8IZH2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
XRN1Q8IZH2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
XRN1Q8IZH2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
XRN1Q8IZH2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC34.23■■■■□ 3.07
XRN1Q8IZH2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
XRN1Q8IZH2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
XRN1Q8IZH2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC34.22■■■■□ 3.07
XRN1Q8IZH2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC34.22■■■■□ 3.07
XRN1Q8IZH2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC34.22■■■■□ 3.07
XRN1Q8IZH2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC34.22■■■■□ 3.07
XRN1Q8IZH2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC34.21■■■■□ 3.07
XRN1Q8IZH2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
XRN1Q8IZH2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC34.21■■■■□ 3.07
XRN1Q8IZH2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC34.21■■■■□ 3.07
XRN1Q8IZH2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC34.21■■■■□ 3.07
XRN1Q8IZH2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
XRN1Q8IZH2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC34.2■■■■□ 3.07
XRN1Q8IZH2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC34.2■■■■□ 3.07
XRN1Q8IZH2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
XRN1Q8IZH2 MIR4281-201ENST00000580852 62 ntBASIC34.2■■■■□ 3.07
XRN1Q8IZH2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC34.19■■■■□ 3.06
XRN1Q8IZH2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC34.19■■■■□ 3.06
XRN1Q8IZH2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC34.19■■■■□ 3.06
XRN1Q8IZH2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC34.19■■■■□ 3.06
XRN1Q8IZH2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
XRN1Q8IZH2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
XRN1Q8IZH2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC34.18■■■■□ 3.06
XRN1Q8IZH2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
XRN1Q8IZH2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC34.18■■■■□ 3.06
XRN1Q8IZH2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
XRN1Q8IZH2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC34.18■■■■□ 3.06
XRN1Q8IZH2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
XRN1Q8IZH2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC34.18■■■■□ 3.06
XRN1Q8IZH2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
XRN1Q8IZH2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
XRN1Q8IZH2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC34.17■■■■□ 3.06
XRN1Q8IZH2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC34.17■■■■□ 3.06
XRN1Q8IZH2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC34.17■■■■□ 3.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms