Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.51■■□□□ 1.68
SCUBE3Q8IX30 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SCUBE3Q8IX30 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SCUBE3Q8IX30 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.51■■□□□ 1.67
SCUBE3Q8IX30 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.51■■□□□ 1.67
SCUBE3Q8IX30 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
SCUBE3Q8IX30 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SCUBE3Q8IX30 AC092803.2-201ENST00000564287 1899 ntBASIC25.51■■□□□ 1.67
SCUBE3Q8IX30 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SCUBE3Q8IX30 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
SCUBE3Q8IX30 AC091060.1-201ENST00000623524 1766 ntBASIC25.5■■□□□ 1.67
SCUBE3Q8IX30 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SCUBE3Q8IX30 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SCUBE3Q8IX30 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SCUBE3Q8IX30 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.49■■□□□ 1.67
SCUBE3Q8IX30 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SCUBE3Q8IX30 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
SCUBE3Q8IX30 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
SCUBE3Q8IX30 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.47■■□□□ 1.67
SCUBE3Q8IX30 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
SCUBE3Q8IX30 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SCUBE3Q8IX30 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SCUBE3Q8IX30 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.47■■□□□ 1.67
SCUBE3Q8IX30 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SCUBE3Q8IX30 ERN1-208ENST00000606895 2068 ntBASIC25.47■■□□□ 1.67
SCUBE3Q8IX30 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.47■■□□□ 1.67
SCUBE3Q8IX30 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SCUBE3Q8IX30 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SCUBE3Q8IX30 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SCUBE3Q8IX30 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.46■■□□□ 1.67
SCUBE3Q8IX30 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SCUBE3Q8IX30 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SCUBE3Q8IX30 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SCUBE3Q8IX30 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.45■■□□□ 1.67
SCUBE3Q8IX30 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SCUBE3Q8IX30 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.45■■□□□ 1.66
SCUBE3Q8IX30 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SCUBE3Q8IX30 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
SCUBE3Q8IX30 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.45■■□□□ 1.66
SCUBE3Q8IX30 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SCUBE3Q8IX30 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SCUBE3Q8IX30 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
SCUBE3Q8IX30 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SCUBE3Q8IX30 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SCUBE3Q8IX30 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SCUBE3Q8IX30 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SCUBE3Q8IX30 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SCUBE3Q8IX30 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.43■■□□□ 1.66
SCUBE3Q8IX30 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.43■■□□□ 1.66
SCUBE3Q8IX30 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SCUBE3Q8IX30 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SCUBE3Q8IX30 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.42■■□□□ 1.66
SCUBE3Q8IX30 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SCUBE3Q8IX30 AL592293.1-201ENST00000502889 1188 ntBASIC25.42■■□□□ 1.66
SCUBE3Q8IX30 NTF6A-201ENST00000591175 560 ntBASIC25.42■■□□□ 1.66
SCUBE3Q8IX30 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SCUBE3Q8IX30 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.42■■□□□ 1.66
SCUBE3Q8IX30 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SCUBE3Q8IX30 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
SCUBE3Q8IX30 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
SCUBE3Q8IX30 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SCUBE3Q8IX30 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SCUBE3Q8IX30 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.4■■□□□ 1.66
SCUBE3Q8IX30 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SCUBE3Q8IX30 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SCUBE3Q8IX30 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.39■■□□□ 1.66
SCUBE3Q8IX30 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.66
SCUBE3Q8IX30 KRT18P60-201ENST00000312876 1297 ntBASIC25.39■■□□□ 1.66
SCUBE3Q8IX30 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.39■■□□□ 1.66
SCUBE3Q8IX30 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SCUBE3Q8IX30 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SCUBE3Q8IX30 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
SCUBE3Q8IX30 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SCUBE3Q8IX30 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.38■■□□□ 1.65
SCUBE3Q8IX30 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCUBE3Q8IX30 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SCUBE3Q8IX30 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SCUBE3Q8IX30 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SCUBE3Q8IX30 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCUBE3Q8IX30 AC145676.1-201ENST00000514988 2004 ntBASIC25.37■■□□□ 1.65
SCUBE3Q8IX30 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCUBE3Q8IX30 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCUBE3Q8IX30 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SCUBE3Q8IX30 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCUBE3Q8IX30 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.37■■□□□ 1.65
SCUBE3Q8IX30 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.37■■□□□ 1.65
SCUBE3Q8IX30 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.37■■□□□ 1.65
SCUBE3Q8IX30 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.37■■□□□ 1.65
SCUBE3Q8IX30 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCUBE3Q8IX30 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.36■■□□□ 1.65
SCUBE3Q8IX30 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.36■■□□□ 1.65
SCUBE3Q8IX30 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCUBE3Q8IX30 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCUBE3Q8IX30 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SCUBE3Q8IX30 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
SCUBE3Q8IX30 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.35■■□□□ 1.65
SCUBE3Q8IX30 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SCUBE3Q8IX30 DUSP8P4-201ENST00000399538 1761 ntBASIC25.34■■□□□ 1.65
SCUBE3Q8IX30 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SCUBE3Q8IX30 AC010501.1-201ENST00000606270 1962 ntBASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms