Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
HIST2H2BCQ6DN03 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HIST2H2BCQ6DN03 AL359504.2-201ENST00000605506 1601 ntBASIC21.27■■□□□ 1
HIST2H2BCQ6DN03 PBX2P1-201ENST00000493219 1291 ntBASIC21.27■■□□□ 1
HIST2H2BCQ6DN03 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.27■■□□□ 1
HIST2H2BCQ6DN03 AC137630.3-201ENST00000607245 391 ntBASIC21.27■■□□□ 1
HIST2H2BCQ6DN03 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST2H2BCQ6DN03 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST2H2BCQ6DN03 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
HIST2H2BCQ6DN03 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.26■□□□□ 0.99
HIST2H2BCQ6DN03 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST2H2BCQ6DN03 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
HIST2H2BCQ6DN03 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
HIST2H2BCQ6DN03 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.26■□□□□ 0.99
HIST2H2BCQ6DN03 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST2H2BCQ6DN03 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.25■□□□□ 0.99
HIST2H2BCQ6DN03 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.25■□□□□ 0.99
HIST2H2BCQ6DN03 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.24■□□□□ 0.99
HIST2H2BCQ6DN03 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST2H2BCQ6DN03 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST2H2BCQ6DN03 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIST2H2BCQ6DN03 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIST2H2BCQ6DN03 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.23■□□□□ 0.99
HIST2H2BCQ6DN03 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIST2H2BCQ6DN03 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H2BCQ6DN03 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.22■□□□□ 0.99
HIST2H2BCQ6DN03 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H2BCQ6DN03 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.22■□□□□ 0.99
HIST2H2BCQ6DN03 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.22■□□□□ 0.99
HIST2H2BCQ6DN03 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.22■□□□□ 0.99
HIST2H2BCQ6DN03 AC010997.5-201ENST00000609182 354 ntBASIC21.22■□□□□ 0.99
HIST2H2BCQ6DN03 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H2BCQ6DN03 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
HIST2H2BCQ6DN03 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H2BCQ6DN03 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.22■□□□□ 0.99
HIST2H2BCQ6DN03 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIST2H2BCQ6DN03 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIST2H2BCQ6DN03 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIST2H2BCQ6DN03 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
HIST2H2BCQ6DN03 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.2■□□□□ 0.98
HIST2H2BCQ6DN03 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HIST2H2BCQ6DN03 KRT18P24-201ENST00000344739 1156 ntBASIC21.2■□□□□ 0.98
HIST2H2BCQ6DN03 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.2■□□□□ 0.98
HIST2H2BCQ6DN03 AL356740.2-201ENST00000601559 647 ntBASIC21.2■□□□□ 0.98
HIST2H2BCQ6DN03 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.2■□□□□ 0.98
HIST2H2BCQ6DN03 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HIST2H2BCQ6DN03 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H2BCQ6DN03 AC106739.1-201ENST00000617035 715 ntBASIC21.19■□□□□ 0.98
HIST2H2BCQ6DN03 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H2BCQ6DN03 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.18■□□□□ 0.98
HIST2H2BCQ6DN03 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HIST2H2BCQ6DN03 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HIST2H2BCQ6DN03 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H2BCQ6DN03 MIR6724-1-201ENST00000616420 92 ntBASIC21.17■□□□□ 0.98
HIST2H2BCQ6DN03 MIR6724-2-201ENST00000616483 92 ntBASIC21.17■□□□□ 0.98
HIST2H2BCQ6DN03 MIR6724-4-201ENST00000617390 92 ntBASIC21.17■□□□□ 0.98
HIST2H2BCQ6DN03 MIR6724-3-201ENST00000622482 92 ntBASIC21.17■□□□□ 0.98
HIST2H2BCQ6DN03 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H2BCQ6DN03 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H2BCQ6DN03 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H2BCQ6DN03 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
HIST2H2BCQ6DN03 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST2H2BCQ6DN03 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HIST2H2BCQ6DN03 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST2H2BCQ6DN03 AC120024.1-201ENST00000562672 995 ntBASIC21.16■□□□□ 0.98
HIST2H2BCQ6DN03 AL512631.2-201ENST00000604634 923 ntBASIC21.16■□□□□ 0.98
HIST2H2BCQ6DN03 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HIST2H2BCQ6DN03 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H2BCQ6DN03 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.15■□□□□ 0.98
HIST2H2BCQ6DN03 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
HIST2H2BCQ6DN03 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
HIST2H2BCQ6DN03 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.15■□□□□ 0.98
HIST2H2BCQ6DN03 AL031432.3-201ENST00000607698 485 ntBASIC21.15■□□□□ 0.98
HIST2H2BCQ6DN03 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H2BCQ6DN03 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H2BCQ6DN03 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.15■□□□□ 0.98
HIST2H2BCQ6DN03 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST2H2BCQ6DN03 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.14■□□□□ 0.98
HIST2H2BCQ6DN03 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.14■□□□□ 0.98
HIST2H2BCQ6DN03 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIST2H2BCQ6DN03 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HIST2H2BCQ6DN03 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.14■□□□□ 0.97
HIST2H2BCQ6DN03 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HIST2H2BCQ6DN03 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.14■□□□□ 0.97
HIST2H2BCQ6DN03 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIST2H2BCQ6DN03 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST2H2BCQ6DN03 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST2H2BCQ6DN03 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST2H2BCQ6DN03 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST2H2BCQ6DN03 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.13■□□□□ 0.97
HIST2H2BCQ6DN03 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST2H2BCQ6DN03 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.13■□□□□ 0.97
HIST2H2BCQ6DN03 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HIST2H2BCQ6DN03 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST2H2BCQ6DN03 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.12■□□□□ 0.97
HIST2H2BCQ6DN03 AL162430.1-201ENST00000480705 870 ntBASIC21.12■□□□□ 0.97
HIST2H2BCQ6DN03 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST2H2BCQ6DN03 SUDS3P1-201ENST00000505831 966 ntBASIC21.12■□□□□ 0.97
HIST2H2BCQ6DN03 AC022616.5-201ENST00000518796 181 ntBASIC21.12■□□□□ 0.97
HIST2H2BCQ6DN03 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms