Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2D3P61077 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.13■□□□□ 0.33
UBE2D3P61077 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.13■□□□□ 0.33
UBE2D3P61077 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBE2D3P61077 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
UBE2D3P61077 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.13■□□□□ 0.33
UBE2D3P61077 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.12■□□□□ 0.33
UBE2D3P61077 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2D3P61077 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2D3P61077 HLA-V-202ENST00000446817 847 ntBASIC17.12■□□□□ 0.33
UBE2D3P61077 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.12■□□□□ 0.33
UBE2D3P61077 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2D3P61077 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2D3P61077 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2D3P61077 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBE2D3P61077 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.11■□□□□ 0.33
UBE2D3P61077 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
UBE2D3P61077 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2D3P61077 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.11■□□□□ 0.33
UBE2D3P61077 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2D3P61077 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2D3P61077 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBE2D3P61077 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2D3P61077 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2D3P61077 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2D3P61077 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2D3P61077 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2D3P61077 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2D3P61077 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2D3P61077 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBE2D3P61077 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.1■□□□□ 0.33
UBE2D3P61077 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2D3P61077 AC010501.1-201ENST00000606270 1962 ntBASIC17.09■□□□□ 0.33
UBE2D3P61077 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2D3P61077 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2D3P61077 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
UBE2D3P61077 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2D3P61077 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2D3P61077 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2D3P61077 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.09■□□□□ 0.33
UBE2D3P61077 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2D3P61077 AL359258.2-201ENST00000564063 1566 ntBASIC17.09■□□□□ 0.33
UBE2D3P61077 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
UBE2D3P61077 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2D3P61077 LINC00543-201ENST00000567234 1845 ntBASIC17.09■□□□□ 0.33
UBE2D3P61077 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2D3P61077 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2D3P61077 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2D3P61077 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2D3P61077 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2D3P61077 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2D3P61077 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
UBE2D3P61077 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2D3P61077 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
UBE2D3P61077 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2D3P61077 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.08■□□□□ 0.32
UBE2D3P61077 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2D3P61077 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.08■□□□□ 0.32
UBE2D3P61077 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2D3P61077 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2D3P61077 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2D3P61077 AC133561.1-201ENST00000568600 2415 ntBASIC17.07■□□□□ 0.32
UBE2D3P61077 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2D3P61077 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
UBE2D3P61077 ERN1-208ENST00000606895 2068 ntBASIC17.07■□□□□ 0.32
UBE2D3P61077 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.07■□□□□ 0.32
UBE2D3P61077 CR559946.2-201ENST00000623684 991 ntBASIC17.06■□□□□ 0.32
UBE2D3P61077 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2D3P61077 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2D3P61077 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.05■□□□□ 0.32
UBE2D3P61077 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2D3P61077 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2D3P61077 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
UBE2D3P61077 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.05■□□□□ 0.32
UBE2D3P61077 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
UBE2D3P61077 AC012676.1-201ENST00000574705 1949 ntBASIC17.05■□□□□ 0.32
UBE2D3P61077 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2D3P61077 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2D3P61077 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2D3P61077 ABHD17AP4-201ENST00000411545 909 ntBASIC17.04■□□□□ 0.32
UBE2D3P61077 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.04■□□□□ 0.32
UBE2D3P61077 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2D3P61077 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2D3P61077 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2D3P61077 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2D3P61077 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
UBE2D3P61077 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2D3P61077 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2D3P61077 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2D3P61077 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2D3P61077 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
UBE2D3P61077 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2D3P61077 AL359504.2-201ENST00000605506 1601 ntBASIC17.03■□□□□ 0.32
UBE2D3P61077 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2D3P61077 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
UBE2D3P61077 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2D3P61077 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2D3P61077 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2D3P61077 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBE2D3P61077 AC126177.7-201ENST00000547904 679 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms