Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 DPB2YPR175W 2070 nt7.69□□□□□ -1.18
MSH4P40965 GLN3YER040W 2193 nt7.69□□□□□ -1.18
MSH4P40965 YDL157CYDL157C 357 nt7.69□□□□□ -1.18
MSH4P40965 ARC35YNR035C 1029 nt7.69□□□□□ -1.18
MSH4P40965 SEC62YPL094C 825 nt7.69□□□□□ -1.18
MSH4P40965 snR34snR34 203 nt7.69□□□□□ -1.18
MSH4P40965 DAL4YIR028W 1908 nt7.69□□□□□ -1.18
MSH4P40965 CCT3YJL014W 1605 nt7.69□□□□□ -1.18
MSH4P40965 CDC10YCR002C 969 nt7.68□□□□□ -1.18
MSH4P40965 ERS1YCR075C 783 nt7.68□□□□□ -1.18
MSH4P40965 YDR187CYDR187C 519 nt7.68□□□□□ -1.18
MSH4P40965 MHT1YLL062C 975 nt7.68□□□□□ -1.18
MSH4P40965 TSR2YLR435W 618 nt7.68□□□□□ -1.18
MSH4P40965 DIA1YMR316W 1011 nt7.68□□□□□ -1.18
MSH4P40965 YBR027CYBR027C 333 nt7.68□□□□□ -1.18
MSH4P40965 DRS1YLL008W 2259 nt7.68□□□□□ -1.18
MSH4P40965 AMN1YBR158W 1650 nt7.67□□□□□ -1.18
MSH4P40965 YJR056CYJR056C 711 nt7.67□□□□□ -1.18
MSH4P40965 PEX34YCL056C 435 nt7.67□□□□□ -1.18
MSH4P40965 YLL066CYLL066C 3618 nt7.67□□□□□ -1.18
MSH4P40965 YIL092WYIL092W 1902 nt7.66□□□□□ -1.18
MSH4P40965 MTR3YGR158C 753 nt7.66□□□□□ -1.18
MSH4P40965 YML018CYML018C 1182 nt7.66□□□□□ -1.18
MSH4P40965 VPS28YPL065W 729 nt7.66□□□□□ -1.18
MSH4P40965 YMR034CYMR034C 1305 nt7.66□□□□□ -1.18
MSH4P40965 TRP1YDR007W 675 nt7.65□□□□□ -1.18
MSH4P40965 TRS31YDR472W 852 nt7.65□□□□□ -1.18
MSH4P40965 CBR1YIL043C 855 nt7.65□□□□□ -1.18
MSH4P40965 YKR045CYKR045C 552 nt7.65□□□□□ -1.18
MSH4P40965 YLR283WYLR283W 945 nt7.65□□□□□ -1.18
MSH4P40965 MRPL24YMR193W 777 nt7.65□□□□□ -1.18
MSH4P40965 SLA2YNL243W 2907 nt7.65□□□□□ -1.18
MSH4P40965 TMA46YOR091W 1038 nt7.65□□□□□ -1.18
MSH4P40965 PEX27YOR193W 1131 nt7.65□□□□□ -1.18
MSH4P40965 TAE1YBR261C 699 nt7.65□□□□□ -1.18
MSH4P40965 NSE5YML023C 1671 nt7.64□□□□□ -1.19
MSH4P40965 APM4YOL062C 1476 nt7.64□□□□□ -1.19
MSH4P40965 VMA3YEL027W 483 nt7.64□□□□□ -1.19
MSH4P40965 HGH1YGR187C 1185 nt7.64□□□□□ -1.19
MSH4P40965 YHR213W-BYHR213W-B 300 nt7.64□□□□□ -1.19
MSH4P40965 YRB2YIL063C 984 nt7.64□□□□□ -1.19
MSH4P40965 YKL077WYKL077W 1179 nt7.64□□□□□ -1.19
MSH4P40965 YAR064WYAR064W 300 nt7.64□□□□□ -1.19
MSH4P40965 NEJ1YLR265C 1029 nt7.64□□□□□ -1.19
MSH4P40965 YBR284WYBR284W 2394 nt7.64□□□□□ -1.19
MSH4P40965 YHK8YHR048W 1545 nt7.63□□□□□ -1.19
MSH4P40965 UIP5YKR044W 1332 nt7.63□□□□□ -1.19
MSH4P40965 TUF1YOR187W 1314 nt7.63□□□□□ -1.19
MSH4P40965 FZF1YGL254W 900 nt7.63□□□□□ -1.19
MSH4P40965 ERP2YAL007C 648 nt7.63□□□□□ -1.19
MSH4P40965 YMR295CYMR295C 594 nt7.63□□□□□ -1.19
MSH4P40965 RUF21RUF21 707 nt7.63□□□□□ -1.19
MSH4P40965 YNL200CYNL200C 741 nt7.63□□□□□ -1.19
MSH4P40965 TAH11YJR046W 1815 nt7.63□□□□□ -1.19
MSH4P40965 DOT1YDR440W 1749 nt7.63□□□□□ -1.19
MSH4P40965 MAF1YDR005C 1188 nt7.62□□□□□ -1.19
MSH4P40965 SCS7YMR272C 1155 nt7.62□□□□□ -1.19
MSH4P40965 PAC2YER007W 1557 nt7.62□□□□□ -1.19
MSH4P40965 ZWF1YNL241C 1518 nt7.62□□□□□ -1.19
MSH4P40965 AVT4YNL101W 2142 nt7.61□□□□□ -1.19
MSH4P40965 CDS1YBR029C 1374 nt7.61□□□□□ -1.19
MSH4P40965 MRPL28YDR462W 444 nt7.61□□□□□ -1.19
MSH4P40965 CUP2YGL166W 678 nt7.61□□□□□ -1.19
MSH4P40965 YSC83YHR017W 1158 nt7.61□□□□□ -1.19
MSH4P40965 CTF8YHR191C 402 nt7.61□□□□□ -1.19
MSH4P40965 YBR241CYBR241C 1467 nt7.61□□□□□ -1.19
MSH4P40965 GPD2YOL059W 1323 nt7.6□□□□□ -1.19
MSH4P40965 GAA1YLR088W 1845 nt7.6□□□□□ -1.19
MSH4P40965 IES1YFL013C 2079 nt7.6□□□□□ -1.19
MSH4P40965 HBN1YCL026C-B 582 nt7.6□□□□□ -1.19
MSH4P40965 LAG2YOL025W 1983 nt7.6□□□□□ -1.19
MSH4P40965 ARO10YDR380W 1908 nt7.59□□□□□ -1.19
MSH4P40965 MED6YHR058C 888 nt7.59□□□□□ -1.19
MSH4P40965 DBR1YKL149C 1218 nt7.59□□□□□ -1.19
MSH4P40965 TAF11YML015C 1041 nt7.59□□□□□ -1.19
MSH4P40965 COQ3YOL096C 939 nt7.59□□□□□ -1.19
MSH4P40965 MRPL23YOR150W 492 nt7.59□□□□□ -1.19
MSH4P40965 YDL177CYDL177C 513 nt7.58□□□□□ -1.2
MSH4P40965 ERP5YHR110W 639 nt7.58□□□□□ -1.2
MSH4P40965 SPC24YMR117C 642 nt7.58□□□□□ -1.2
MSH4P40965 ATF1YOR377W 1578 nt7.58□□□□□ -1.2
MSH4P40965 PAP1YKR002W 1707 nt7.58□□□□□ -1.2
MSH4P40965 MSP1YGR028W 1089 nt7.57□□□□□ -1.2
MSH4P40965 PRE3YJL001W 648 nt7.57□□□□□ -1.2
MSH4P40965 YLR157W-EYLR157W-E 165 nt7.57□□□□□ -1.2
MSH4P40965 YNR014WYNR014W 639 nt7.57□□□□□ -1.2
MSH4P40965 MSS116YDR194C 1995 nt7.57□□□□□ -1.2
MSH4P40965 ISR1YPR106W 1332 nt7.56□□□□□ -1.2
MSH4P40965 CYC8YBR112C 2901 nt7.56□□□□□ -1.2
MSH4P40965 COQ1YBR003W 1422 nt7.56□□□□□ -1.2
MSH4P40965 NMD4YLR363C 657 nt7.56□□□□□ -1.2
MSH4P40965 YOL079WYOL079W 399 nt7.56□□□□□ -1.2
MSH4P40965 YHR020WYHR020W 2067 nt7.56□□□□□ -1.2
MSH4P40965 PPM2YOL141W 2088 nt7.56□□□□□ -1.2
MSH4P40965 CEF1YMR213W 1773 nt7.56□□□□□ -1.2
MSH4P40965 CNM67YNL225C 1746 nt7.55□□□□□ -1.2
MSH4P40965 FRE5YOR384W 2085 nt7.55□□□□□ -1.2
MSH4P40965 ATP6Q0085 780 nt7.55□□□□□ -1.2
MSH4P40965 MAD2YJL030W 591 nt7.55□□□□□ -1.2
MSH4P40965 MRPL10YNL284C 969 nt7.55□□□□□ -1.2
Retrieved 100 of 7,029 protein–RNA pairs in 43.1 ms