Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.94■□□□□ 0.78
ATF4P18848 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.94■□□□□ 0.78
ATF4P18848 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.94■□□□□ 0.78
ATF4P18848 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF4P18848 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATF4P18848 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ATF4P18848 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.93■□□□□ 0.78
ATF4P18848 AL391121.1-201ENST00000607967 1349 ntBASIC19.93■□□□□ 0.78
ATF4P18848 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF4P18848 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ATF4P18848 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF4P18848 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.93■□□□□ 0.78
ATF4P18848 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF4P18848 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
ATF4P18848 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.92■□□□□ 0.78
ATF4P18848 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATF4P18848 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATF4P18848 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.92■□□□□ 0.78
ATF4P18848 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATF4P18848 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATF4P18848 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATF4P18848 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.92■□□□□ 0.78
ATF4P18848 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATF4P18848 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATF4P18848 C9orf163-202ENST00000624034 2573 ntBASIC19.91■□□□□ 0.78
ATF4P18848 AL121603.2-201ENST00000557373 2117 ntBASIC19.91■□□□□ 0.78
ATF4P18848 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.91■□□□□ 0.78
ATF4P18848 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ATF4P18848 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ATF4P18848 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.91■□□□□ 0.78
ATF4P18848 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF4P18848 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ATF4P18848 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF4P18848 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.9■□□□□ 0.78
ATF4P18848 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF4P18848 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
ATF4P18848 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF4P18848 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF4P18848 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.89■□□□□ 0.77
ATF4P18848 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATF4P18848 ERN1-208ENST00000606895 2068 ntBASIC19.89■□□□□ 0.77
ATF4P18848 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF4P18848 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF4P18848 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF4P18848 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.88■□□□□ 0.77
ATF4P18848 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ATF4P18848 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF4P18848 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF4P18848 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATF4P18848 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ATF4P18848 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATF4P18848 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATF4P18848 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATF4P18848 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.87■□□□□ 0.77
ATF4P18848 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATF4P18848 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATF4P18848 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATF4P18848 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.86■□□□□ 0.77
ATF4P18848 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF4P18848 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF4P18848 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF4P18848 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ATF4P18848 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF4P18848 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF4P18848 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF4P18848 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF4P18848 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.85■□□□□ 0.77
ATF4P18848 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF4P18848 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF4P18848 RPS2P35-201ENST00000443417 897 ntBASIC19.85■□□□□ 0.77
ATF4P18848 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF4P18848 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ATF4P18848 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.84■□□□□ 0.77
ATF4P18848 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.84■□□□□ 0.77
ATF4P18848 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATF4P18848 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATF4P18848 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATF4P18848 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ATF4P18848 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.83■□□□□ 0.77
ATF4P18848 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATF4P18848 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATF4P18848 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.83■□□□□ 0.76
ATF4P18848 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.82■□□□□ 0.76
ATF4P18848 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATF4P18848 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ATF4P18848 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATF4P18848 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATF4P18848 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.82■□□□□ 0.76
ATF4P18848 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATF4P18848 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATF4P18848 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATF4P18848 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
ATF4P18848 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATF4P18848 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATF4P18848 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATF4P18848 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ATF4P18848 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATF4P18848 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.8■□□□□ 0.76
ATF4P18848 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
ATF4P18848 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms