Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 DUX4L20-201ENST00000619712 1269 ntBASIC21.15■□□□□ 0.98
ATF1P18846 DUX4L21-201ENST00000622058 1269 ntBASIC21.15■□□□□ 0.98
ATF1P18846 DUX4L10-201ENST00000622460 1267 ntBASIC21.15■□□□□ 0.98
ATF1P18846 DUX4L25-201ENST00000624915 1269 ntBASIC21.15■□□□□ 0.98
ATF1P18846 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.15■□□□□ 0.98
ATF1P18846 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.15■□□□□ 0.98
ATF1P18846 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATF1P18846 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
ATF1P18846 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ATF1P18846 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.14■□□□□ 0.97
ATF1P18846 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATF1P18846 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.14■□□□□ 0.97
ATF1P18846 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATF1P18846 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATF1P18846 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATF1P18846 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATF1P18846 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATF1P18846 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
ATF1P18846 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.13■□□□□ 0.97
ATF1P18846 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.13■□□□□ 0.97
ATF1P18846 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATF1P18846 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.13■□□□□ 0.97
ATF1P18846 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATF1P18846 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATF1P18846 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATF1P18846 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.12■□□□□ 0.97
ATF1P18846 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.12■□□□□ 0.97
ATF1P18846 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATF1P18846 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
ATF1P18846 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ATF1P18846 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATF1P18846 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATF1P18846 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATF1P18846 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATF1P18846 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATF1P18846 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATF1P18846 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATF1P18846 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.11■□□□□ 0.97
ATF1P18846 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.11■□□□□ 0.97
ATF1P18846 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATF1P18846 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATF1P18846 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATF1P18846 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATF1P18846 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATF1P18846 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.1■□□□□ 0.97
ATF1P18846 AC008813.1-201ENST00000536597 885 ntBASIC21.1■□□□□ 0.97
ATF1P18846 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.1■□□□□ 0.97
ATF1P18846 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATF1P18846 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.1■□□□□ 0.97
ATF1P18846 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATF1P18846 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.09■□□□□ 0.97
ATF1P18846 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATF1P18846 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATF1P18846 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATF1P18846 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.09■□□□□ 0.97
ATF1P18846 DUX4L11-201ENST00000611504 1267 ntBASIC21.09■□□□□ 0.97
ATF1P18846 DUX4L12-201ENST00000614593 1267 ntBASIC21.09■□□□□ 0.97
ATF1P18846 DUX4L14-201ENST00000621227 1267 ntBASIC21.09■□□□□ 0.97
ATF1P18846 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATF1P18846 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATF1P18846 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATF1P18846 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ATF1P18846 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.09■□□□□ 0.97
ATF1P18846 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATF1P18846 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
ATF1P18846 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATF1P18846 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATF1P18846 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATF1P18846 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATF1P18846 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATF1P18846 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATF1P18846 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATF1P18846 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.08■□□□□ 0.96
ATF1P18846 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATF1P18846 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
ATF1P18846 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ATF1P18846 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATF1P18846 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.07■□□□□ 0.96
ATF1P18846 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ATF1P18846 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATF1P18846 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.07■□□□□ 0.96
ATF1P18846 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
ATF1P18846 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ATF1P18846 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ATF1P18846 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.06■□□□□ 0.96
ATF1P18846 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATF1P18846 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.06■□□□□ 0.96
ATF1P18846 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ATF1P18846 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATF1P18846 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATF1P18846 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.06■□□□□ 0.96
ATF1P18846 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.06■□□□□ 0.96
ATF1P18846 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATF1P18846 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF1P18846 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF1P18846 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.05■□□□□ 0.96
ATF1P18846 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF1P18846 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF1P18846 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATF1P18846 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms