Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LST1O00453 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LST1O00453 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LST1O00453 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LST1O00453 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LST1O00453 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LST1O00453 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC15.73■□□□□ 0.11
LST1O00453 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LST1O00453 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LST1O00453 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LST1O00453 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LST1O00453 AL024507.2-201ENST00000606070 2574 ntBASIC15.73■□□□□ 0.11
LST1O00453 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LST1O00453 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LST1O00453 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LST1O00453 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LST1O00453 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC15.73■□□□□ 0.11
LST1O00453 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LST1O00453 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LST1O00453 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LST1O00453 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC15.72■□□□□ 0.11
LST1O00453 AC006077.2-201ENST00000623591 457 ntBASIC15.72■□□□□ 0.11
LST1O00453 WASH5P-204ENST00000632292 975 ntBASIC15.72■□□□□ 0.11
LST1O00453 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LST1O00453 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
LST1O00453 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LST1O00453 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LST1O00453 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LST1O00453 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LST1O00453 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LST1O00453 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LST1O00453 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LST1O00453 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LST1O00453 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC15.71■□□□□ 0.11
LST1O00453 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LST1O00453 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LST1O00453 EED-207ENST00000528180 1745 ntTSL 5 BASIC15.71■□□□□ 0.1
LST1O00453 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LST1O00453 AL117328.2-201ENST00000624617 1940 ntBASIC15.7■□□□□ 0.1
LST1O00453 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LST1O00453 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LST1O00453 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LST1O00453 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LST1O00453 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LST1O00453 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LST1O00453 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LST1O00453 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LST1O00453 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.7■□□□□ 0.1
LST1O00453 ME2-208ENST00000638937 2471 ntTSL 5 BASIC15.7■□□□□ 0.1
LST1O00453 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LST1O00453 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC15.69■□□□□ 0.1
LST1O00453 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.69■□□□□ 0.1
LST1O00453 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LST1O00453 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LST1O00453 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LST1O00453 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LST1O00453 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LST1O00453 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LST1O00453 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC15.68■□□□□ 0.1
LST1O00453 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
LST1O00453 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LST1O00453 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LST1O00453 AC096887.2-201ENST00000623443 1957 ntBASIC15.68■□□□□ 0.1
LST1O00453 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LST1O00453 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LST1O00453 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LST1O00453 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LST1O00453 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LST1O00453 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LST1O00453 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
LST1O00453 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LST1O00453 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
LST1O00453 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LST1O00453 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LST1O00453 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LST1O00453 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LST1O00453 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC15.66■□□□□ 0.1
LST1O00453 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LST1O00453 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LST1O00453 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LST1O00453 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC15.65■□□□□ 0.1
LST1O00453 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LST1O00453 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LST1O00453 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LST1O00453 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LST1O00453 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LST1O00453 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LST1O00453 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
LST1O00453 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LST1O00453 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LST1O00453 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LST1O00453 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LST1O00453 EBPL-203ENST00000378270 579 ntTSL 2 BASIC15.64■□□□□ 0.09
LST1O00453 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC15.64■□□□□ 0.09
LST1O00453 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LST1O00453 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LST1O00453 AC142472.1-201ENST00000612013 1741 ntBASIC15.64■□□□□ 0.09
LST1O00453 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LST1O00453 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LST1O00453 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms