Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRDV1A0A1B0GX56 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRDV1A0A1B0GX56 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.28■■□□□ 1
TRDV1A0A1B0GX56 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.28■■□□□ 1
TRDV1A0A1B0GX56 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRDV1A0A1B0GX56 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.28■■□□□ 1
TRDV1A0A1B0GX56 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.28■■□□□ 1
TRDV1A0A1B0GX56 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRDV1A0A1B0GX56 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TRDV1A0A1B0GX56 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRDV1A0A1B0GX56 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRDV1A0A1B0GX56 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRDV1A0A1B0GX56 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRDV1A0A1B0GX56 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRDV1A0A1B0GX56 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRDV1A0A1B0GX56 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.26■□□□□ 0.99
TRDV1A0A1B0GX56 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TRDV1A0A1B0GX56 LINC01124-201ENST00000409786 2117 ntBASIC21.26■□□□□ 0.99
TRDV1A0A1B0GX56 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRDV1A0A1B0GX56 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRDV1A0A1B0GX56 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRDV1A0A1B0GX56 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRDV1A0A1B0GX56 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRDV1A0A1B0GX56 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
TRDV1A0A1B0GX56 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRDV1A0A1B0GX56 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRDV1A0A1B0GX56 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRDV1A0A1B0GX56 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRDV1A0A1B0GX56 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRDV1A0A1B0GX56 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TRDV1A0A1B0GX56 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRDV1A0A1B0GX56 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.24■□□□□ 0.99
TRDV1A0A1B0GX56 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.24■□□□□ 0.99
TRDV1A0A1B0GX56 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRDV1A0A1B0GX56 AP003733.4-201ENST00000623785 1697 ntBASIC21.24■□□□□ 0.99
TRDV1A0A1B0GX56 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRDV1A0A1B0GX56 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
TRDV1A0A1B0GX56 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TRDV1A0A1B0GX56 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRDV1A0A1B0GX56 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRDV1A0A1B0GX56 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRDV1A0A1B0GX56 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
TRDV1A0A1B0GX56 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.23■□□□□ 0.99
TRDV1A0A1B0GX56 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.23■□□□□ 0.99
TRDV1A0A1B0GX56 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRDV1A0A1B0GX56 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRDV1A0A1B0GX56 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRDV1A0A1B0GX56 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRDV1A0A1B0GX56 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.22■□□□□ 0.99
TRDV1A0A1B0GX56 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRDV1A0A1B0GX56 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRDV1A0A1B0GX56 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRDV1A0A1B0GX56 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRDV1A0A1B0GX56 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRDV1A0A1B0GX56 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.22■□□□□ 0.99
TRDV1A0A1B0GX56 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRDV1A0A1B0GX56 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRDV1A0A1B0GX56 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRDV1A0A1B0GX56 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRDV1A0A1B0GX56 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRDV1A0A1B0GX56 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.21■□□□□ 0.99
TRDV1A0A1B0GX56 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.21■□□□□ 0.99
TRDV1A0A1B0GX56 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.21■□□□□ 0.99
TRDV1A0A1B0GX56 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRDV1A0A1B0GX56 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
TRDV1A0A1B0GX56 AC068473.5-201ENST00000616428 2072 ntBASIC21.2■□□□□ 0.99
TRDV1A0A1B0GX56 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRDV1A0A1B0GX56 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TRDV1A0A1B0GX56 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.2■□□□□ 0.98
TRDV1A0A1B0GX56 AC097639.1-201ENST00000565519 1891 ntBASIC21.2■□□□□ 0.98
TRDV1A0A1B0GX56 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRDV1A0A1B0GX56 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TRDV1A0A1B0GX56 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRDV1A0A1B0GX56 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRDV1A0A1B0GX56 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRDV1A0A1B0GX56 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRDV1A0A1B0GX56 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRDV1A0A1B0GX56 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TRDV1A0A1B0GX56 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRDV1A0A1B0GX56 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.19■□□□□ 0.98
TRDV1A0A1B0GX56 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRDV1A0A1B0GX56 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRDV1A0A1B0GX56 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRDV1A0A1B0GX56 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRDV1A0A1B0GX56 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TRDV1A0A1B0GX56 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.18■□□□□ 0.98
TRDV1A0A1B0GX56 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.18■□□□□ 0.98
TRDV1A0A1B0GX56 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.17■□□□□ 0.98
TRDV1A0A1B0GX56 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRDV1A0A1B0GX56 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRDV1A0A1B0GX56 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRDV1A0A1B0GX56 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRDV1A0A1B0GX56 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TRDV1A0A1B0GX56 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
TRDV1A0A1B0GX56 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRDV1A0A1B0GX56 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRDV1A0A1B0GX56 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRDV1A0A1B0GX56 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRDV1A0A1B0GX56 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
TRDV1A0A1B0GX56 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms