Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-5A0A0J9YX44 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21■□□□□ 0.95
TRBV5-5A0A0J9YX44 MIR219A2-201ENST00000608502 1504 ntBASIC21■□□□□ 0.95
TRBV5-5A0A0J9YX44 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
TRBV5-5A0A0J9YX44 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21■□□□□ 0.95
TRBV5-5A0A0J9YX44 AC008813.1-201ENST00000536597 885 ntBASIC21■□□□□ 0.95
TRBV5-5A0A0J9YX44 AC148477.6-201ENST00000623746 465 ntBASIC21■□□□□ 0.95
TRBV5-5A0A0J9YX44 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-5A0A0J9YX44 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-5A0A0J9YX44 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21■□□□□ 0.95
TRBV5-5A0A0J9YX44 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-5A0A0J9YX44 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-5A0A0J9YX44 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-5A0A0J9YX44 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.99■□□□□ 0.95
TRBV5-5A0A0J9YX44 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.99■□□□□ 0.95
TRBV5-5A0A0J9YX44 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.99■□□□□ 0.95
TRBV5-5A0A0J9YX44 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-5A0A0J9YX44 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-5A0A0J9YX44 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-5A0A0J9YX44 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-5A0A0J9YX44 LINC01971-201ENST00000617888 1048 ntBASIC20.98■□□□□ 0.95
TRBV5-5A0A0J9YX44 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-5A0A0J9YX44 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-5A0A0J9YX44 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TRBV5-5A0A0J9YX44 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.98■□□□□ 0.95
TRBV5-5A0A0J9YX44 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-5A0A0J9YX44 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-5A0A0J9YX44 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-5A0A0J9YX44 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-5A0A0J9YX44 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.97■□□□□ 0.95
TRBV5-5A0A0J9YX44 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-5A0A0J9YX44 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-5A0A0J9YX44 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-5A0A0J9YX44 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-5A0A0J9YX44 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 DUX4L13-201ENST00000554103 1267 ntBASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 DUX4L15-201ENST00000611059 1267 ntBASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 DUX4L23-201ENST00000615195 1269 ntBASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 DUX4L24-201ENST00000617576 1269 ntBASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 DUX4L22-201ENST00000618238 1269 ntBASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 DUX4L20-201ENST00000619712 1269 ntBASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 DUX4L21-201ENST00000622058 1269 ntBASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 DUX4L10-201ENST00000622460 1267 ntBASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 DUX4L25-201ENST00000624915 1269 ntBASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 AL359504.2-201ENST00000605506 1601 ntBASIC20.96■□□□□ 0.95
TRBV5-5A0A0J9YX44 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
TRBV5-5A0A0J9YX44 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.95■□□□□ 0.94
TRBV5-5A0A0J9YX44 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.95■□□□□ 0.94
TRBV5-5A0A0J9YX44 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-5A0A0J9YX44 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-5A0A0J9YX44 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-5A0A0J9YX44 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-5A0A0J9YX44 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-5A0A0J9YX44 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-5A0A0J9YX44 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-5A0A0J9YX44 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-5A0A0J9YX44 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-5A0A0J9YX44 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-5A0A0J9YX44 AL359258.2-201ENST00000564063 1566 ntBASIC20.93■□□□□ 0.94
TRBV5-5A0A0J9YX44 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV5-5A0A0J9YX44 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV5-5A0A0J9YX44 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV5-5A0A0J9YX44 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.93■□□□□ 0.94
TRBV5-5A0A0J9YX44 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.93■□□□□ 0.94
TRBV5-5A0A0J9YX44 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV5-5A0A0J9YX44 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV5-5A0A0J9YX44 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV5-5A0A0J9YX44 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.92■□□□□ 0.94
TRBV5-5A0A0J9YX44 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TRBV5-5A0A0J9YX44 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV5-5A0A0J9YX44 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.92■□□□□ 0.94
TRBV5-5A0A0J9YX44 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.92■□□□□ 0.94
TRBV5-5A0A0J9YX44 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV5-5A0A0J9YX44 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV5-5A0A0J9YX44 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV5-5A0A0J9YX44 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
TRBV5-5A0A0J9YX44 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TRBV5-5A0A0J9YX44 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TRBV5-5A0A0J9YX44 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV5-5A0A0J9YX44 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV5-5A0A0J9YX44 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV5-5A0A0J9YX44 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV5-5A0A0J9YX44 AP003733.4-201ENST00000623785 1697 ntBASIC20.9■□□□□ 0.94
TRBV5-5A0A0J9YX44 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV5-5A0A0J9YX44 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV5-5A0A0J9YX44 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV5-5A0A0J9YX44 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.9■□□□□ 0.94
TRBV5-5A0A0J9YX44 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV5-5A0A0J9YX44 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRBV5-5A0A0J9YX44 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV5-5A0A0J9YX44 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV5-5A0A0J9YX44 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TRBV5-5A0A0J9YX44 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRBV5-5A0A0J9YX44 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms