Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.934e-6■■□□□ 11.7
MATR3P43243 SH3PXD2A-204ENST00000420222 3251 ntTSL 216.93■□□□□ 0.31e-6■■□□□ 11.7
MATR3P43243 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.071e-6■■□□□ 11.7
MATR3P43243 SH3PXD2A-201ENST00000315994 5504 ntTSL 1 (best)14.78□□□□□ -0.041e-6■■□□□ 11.7
MATR3P43243 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.791e-6■■□□□ 11.7
MATR3P43243 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.412e-10■■□□□ 11.7
MATR3P43243 ABCD4-202ENST00000460308 1003 ntTSL 1 (best)23.49■■□□□ 1.352e-10■■□□□ 11.7
MATR3P43243 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.16■■□□□ 1.142e-10■■□□□ 11.7
MATR3P43243 ABCD4-208ENST00000475240 546 ntTSL 521.01■□□□□ 0.952e-10■■□□□ 11.7
MATR3P43243 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.82e-10■■□□□ 11.7
MATR3P43243 FAM169A-206ENST00000514200 751 ntTSL 419.99■□□□□ 0.792e-10■■□□□ 11.7
MATR3P43243 ABCD4-209ENST00000477803 594 ntTSL 219.87■□□□□ 0.772e-10■■□□□ 11.7
MATR3P43243 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.87■□□□□ 0.772e-10■■□□□ 11.7
MATR3P43243 FAM60A-208ENST00000543615 669 ntTSL 519.69■□□□□ 0.742e-10■■□□□ 11.7
MATR3P43243 FAM169A-205ENST00000513277 803 ntTSL 318.3■□□□□ 0.522e-10■■□□□ 11.7
MATR3P43243 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.492e-10■■□□□ 11.7
MATR3P43243 ABCD4-218ENST00000553486 1842 ntTSL 1 (best)16.49■□□□□ 0.232e-10■■□□□ 11.7
MATR3P43243 FAM60A-204ENST00000536836 1734 ntTSL 215.45■□□□□ 0.062e-10■■□□□ 11.7
MATR3P43243 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.34■□□□□ 0.052e-10■■□□□ 11.7
MATR3P43243 ABCD4-219ENST00000553745 1770 ntTSL 215.27■□□□□ 0.042e-10■■□□□ 11.7
MATR3P43243 ABCD4-224ENST00000556119 838 ntTSL 514.21□□□□□ -0.132e-10■■□□□ 11.7
MATR3P43243 ABCD4-205ENST00000469672 966 ntTSL 1 (best)14.09□□□□□ -0.152e-10■■□□□ 11.7
MATR3P43243 ABCD4-211ENST00000481935 2336 ntTSL 513.81□□□□□ -0.22e-10■■□□□ 11.7
MATR3P43243 ABCD4-215ENST00000493427 736 ntTSL 412.94□□□□□ -0.342e-10■■□□□ 11.7
MATR3P43243 ABCD4-226ENST00000556971 637 ntTSL 312.74□□□□□ -0.372e-10■■□□□ 11.7
MATR3P43243 FAM60A-206ENST00000539409 2532 ntTSL 1 (best) BASIC12.46□□□□□ -0.422e-10■■□□□ 11.7
MATR3P43243 ABCD4-221ENST00000554453 736 ntTSL 512.12□□□□□ -0.472e-10■■□□□ 11.7
MATR3P43243 ABCD4-206ENST00000470637 853 ntTSL 512.11□□□□□ -0.472e-10■■□□□ 11.7
MATR3P43243 ABCD4-201ENST00000356924 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.492e-10■■□□□ 11.7
MATR3P43243 ABCD4-222ENST00000555617 542 ntTSL 411.7□□□□□ -0.542e-10■■□□□ 11.7
MATR3P43243 FAM60A-201ENST00000337682 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.552e-10■■□□□ 11.7
MATR3P43243 GID8-201ENST00000266069 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.623e-6■■□□□ 11.7
MATR3P43243 ABCD4-227ENST00000557554 523 ntTSL 410.69□□□□□ -0.72e-10■■□□□ 11.7
MATR3P43243 FAM169A-202ENST00000506954 571 ntTSL 410.17□□□□□ -0.782e-10■■□□□ 11.7
MATR3P43243 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.793e-8■■□□□ 11.7
MATR3P43243 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.19□□□□□ -1.13e-8■■□□□ 11.7
MATR3P43243 MAPK14-205ENST00000472333 585 ntTSL 57.87□□□□□ -1.152e-10■■□□□ 11.7
MATR3P43243 CHD2-221ENST00000635856 4236 ntTSL 56.81□□□□□ -1.323e-8■■□□□ 11.7
MATR3P43243 CHD2-227ENST00000637572 4452 ntTSL 56.24□□□□□ -1.413e-8■■□□□ 11.7
MATR3P43243 FAM60A-205ENST00000539004 459 ntTSL 54.67□□□□□ -1.662e-10■■□□□ 11.7
MATR3P43243 LGR4-206ENST00000530658 553 ntTSL 43.58□□□□□ -1.842e-10■■□□□ 11.7
MATR3P43243 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.44□□□□□ -1.383e-7■■□□□ 11.7
MATR3P43243 AC138409.2-202ENST00000507274 458 ntBASIC6.33□□□□□ -1.43e-7■■□□□ 11.7
MATR3P43243 CDK19-205ENST00000460913 448 ntTSL 513.41□□□□□ -0.269e-7■■□□□ 11.6
MATR3P43243 PAH-212ENST00000551337 675 ntTSL 319.61■□□□□ 0.738e-7■■□□□ 11.6
MATR3P43243 PAH-206ENST00000548928 472 ntTSL 35.52□□□□□ -1.538e-7■■□□□ 11.6
MATR3P43243 PAH-210ENST00000550978 652 ntTSL 23.84□□□□□ -1.798e-7■■□□□ 11.6
MATR3P43243 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.25■■■□□ 2.277e-8■■□□□ 11.6
MATR3P43243 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.83■■□□□ 1.897e-8■■□□□ 11.6
MATR3P43243 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.557e-8■■□□□ 11.6
MATR3P43243 MSANTD2-207ENST00000634413 599 ntTSL 523.58■■□□□ 1.377e-8■■□□□ 11.6
MATR3P43243 MSANTD2-205ENST00000527140 775 ntTSL 322.78■■□□□ 1.247e-8■■□□□ 11.6
MATR3P43243 AP2A2-206ENST00000525891 743 ntTSL 421.46■■□□□ 1.032e-6■■□□□ 11.6
MATR3P43243 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 17e-8■■□□□ 11.6
MATR3P43243 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.867e-8■■□□□ 11.6
MATR3P43243 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.66■□□□□ 0.747e-8■■□□□ 11.6
MATR3P43243 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.81■□□□□ 0.67e-8■■□□□ 11.6
MATR3P43243 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.592e-6■■□□□ 11.6
MATR3P43243 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.09■□□□□ 0.492e-6■■□□□ 11.6
MATR3P43243 CLASRP-202ENST00000391952 2213 ntTSL 1 (best)17.12■□□□□ 0.337e-8■■□□□ 11.6
MATR3P43243 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.37e-8■■□□□ 11.6
MATR3P43243 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.37e-8■■□□□ 11.6
MATR3P43243 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.187e-8■■□□□ 11.6
MATR3P43243 CMIP-210ENST00000569146 1589 ntTSL 515.61■□□□□ 0.097e-8■■□□□ 11.6
MATR3P43243 AP2A2-213ENST00000528815 3072 ntTSL 215.5■□□□□ 0.072e-6■■□□□ 11.6
MATR3P43243 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.072e-6■■□□□ 11.6
MATR3P43243 CMIP-207ENST00000565680 556 ntTSL 415.4■□□□□ 0.067e-8■■□□□ 11.6
MATR3P43243 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.14■□□□□ 0.017e-8■■□□□ 11.6
MATR3P43243 CLASRP-207ENST00000587112 867 ntTSL 1 (best)13.71□□□□□ -0.217e-8■■□□□ 11.6
MATR3P43243 SLC1A2-204ENST00000449068 685 ntTSL 313.34□□□□□ -0.277e-8■■□□□ 11.6
MATR3P43243 CLASRP-213ENST00000591410 572 ntTSL 412.08□□□□□ -0.487e-8■■□□□ 11.6
MATR3P43243 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC11.97□□□□□ -0.497e-8■■□□□ 11.6
MATR3P43243 CLASRP-209ENST00000588016 967 ntTSL 210.33□□□□□ -0.767e-8■■□□□ 11.6
MATR3P43243 IMPA1-211ENST00000522997 770 ntTSL 58.81□□□□□ -17e-8■■□□□ 11.6
MATR3P43243 IMPA1-213ENST00000523942 793 ntTSL 38.63□□□□□ -1.037e-8■■□□□ 11.6
MATR3P43243 IMPA1-207ENST00000519964 653 ntTSL 38.41□□□□□ -1.067e-8■■□□□ 11.6
MATR3P43243 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.02□□□□□ -1.137e-8■■□□□ 11.6
MATR3P43243 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.29□□□□□ -1.247e-8■■□□□ 11.6
MATR3P43243 IMPA1-205ENST00000518202 627 ntTSL 46.45□□□□□ -1.387e-8■■□□□ 11.6
MATR3P43243 IMPA1-209ENST00000521360 543 ntTSL 56.31□□□□□ -1.47e-8■■□□□ 11.6
MATR3P43243 IMPA1-210ENST00000521979 566 ntTSL 46.31□□□□□ -1.47e-8■■□□□ 11.6
MATR3P43243 IMPA1-212ENST00000523710 731 ntTSL 36.31□□□□□ -1.47e-8■■□□□ 11.6
MATR3P43243 IMPA1-206ENST00000519816 617 ntTSL 35.31□□□□□ -1.567e-8■■□□□ 11.6
MATR3P43243 TPP2-203ENST00000466153 911 ntTSL 55.2□□□□□ -1.587e-8■■□□□ 11.6
MATR3P43243 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.597e-8■■□□□ 11.6
MATR3P43243 IMPA1-204ENST00000518188 773 ntTSL 44.8□□□□□ -1.647e-8■■□□□ 11.6
MATR3P43243 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.717e-8■■□□□ 11.6
MATR3P43243 TPP2-206ENST00000490420 502 ntTSL 23.73□□□□□ -1.817e-8■■□□□ 11.6
MATR3P43243 FAM135A-216ENST00000515323 1926 ntTSL 521.73■■□□□ 1.077e-11■■□□□ 11.5
MATR3P43243 ITIH2-202ENST00000379587 2848 ntTSL 5 BASIC10.91□□□□□ -0.667e-11■■□□□ 11.5
MATR3P43243 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.797e-11■■□□□ 11.5
MATR3P43243 FAM135A-204ENST00000393299 1780 ntTSL 22.38□□□□□ -2.037e-11■■□□□ 11.5
MATR3P43243 TTC3-216ENST00000479930 8998 ntTSL 1 (best)11.13□□□□□ -0.637e-7■■□□□ 11.5
MATR3P43243 TTC3-215ENST00000476784 7425 ntTSL 28.24□□□□□ -1.097e-7■■□□□ 11.5
MATR3P43243 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.217e-7■■□□□ 11.5
MATR3P43243 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.457e-7■■□□□ 11.5
MATR3P43243 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.544e-7■■□□□ 11.5
MATR3P43243 FOXK2-204ENST00000527313 779 ntTSL 322.01■■□□□ 1.114e-7■■□□□ 11.5
MATR3P43243 FOXK2-202ENST00000473637 3462 ntTSL 1 (best)21.6■■□□□ 1.054e-7■■□□□ 11.5
MATR3P43243 FOXK2-207ENST00000570585 756 ntTSL 314.99□□□□□ -0.014e-7■■□□□ 11.5
Retrieved 100 of 16,209 protein–RNA pairs in 699.1 ms