RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 NISCHQ9Y2I1 1504 aa51.7■■■■■ 5.87
ABCD4-202ENST00000460308 CCDC180Q9P1Z9 1646 aa45.92■■■■■ 4.94
ABCD4-202ENST00000460308 ABCC9O60706 1549 aa44.99■■■■■ 4.79
ABCD4-202ENST00000460308 DCAF8L2P0C7V8 631 aa43.41■■■■■ 4.54
ABCD4-202ENST00000460308 RB1CC1Q8TDY2 1594 aa43.27■■■■■ 4.52
ABCD4-202ENST00000460308 NACADO15069 1562 aa43.21■■■■■ 4.51
ABCD4-202ENST00000460308 ZCCHC6Q5VYS8 1495 aaKnown RBP43.04■■■■■ 4.48
ABCD4-202ENST00000460308 MYO15BQ96JP2 1530 aa42.91■■■■■ 4.46
ABCD4-202ENST00000460308 DCAF1Q9Y4B6 1507 aa42.75■■■■■ 4.43
ABCD4-202ENST00000460308 UNC13AQ9UPW8 1703 aa42.23■■■■■ 4.35
ABCD4-202ENST00000460308 PABPN1Q86U42 306 aaKnown RBP eCLIP42.1■■■■■ 4.33
ABCD4-202ENST00000460308 SCRIBQ14160 1630 aa41.95■■■■■ 4.31
ABCD4-202ENST00000460308 BICRAQ9NZM4 1560 aa41.88■■■■■ 4.29
ABCD4-202ENST00000460308 SHROOM4Q9ULL8 1493 aa41.46■■■■■ 4.23
ABCD4-202ENST00000460308 DNAJC5BQ9UF47 199 aa41.24■■■■■ 4.19
ABCD4-202ENST00000460308 EIF4G1Q04637 1599 aaKnown RBP40.82■■■■■ 4.12
ABCD4-202ENST00000460308 CC2D2AQ9P2K1 1620 aa40.66■■■■■ 4.1
ABCD4-202ENST00000460308 CECR2Q9BXF3 1484 aa40.41■■■■■ 4.06
ABCD4-202ENST00000460308 SMARCA4P51532 1647 aa40.1■■■■■ 4.01
ABCD4-202ENST00000460308 BAZ1AQ9NRL2 1556 aaPredicted RBP40.09■■■■■ 4.01
ABCD4-202ENST00000460308 ATAD2BQ9ULI0 1458 aa39.89■■■■□ 3.98
ABCD4-202ENST00000460308 NCAPD3P42695 1498 aa39.87■■■■□ 3.97
ABCD4-202ENST00000460308 SMARCA2P51531 1590 aa39.86■■■■□ 3.97
ABCD4-202ENST00000460308 MROH2BQ7Z745 1585 aa39.84■■■■□ 3.97
ABCD4-202ENST00000460308 PEG3Q9GZU2 1588 aa39.67■■■■□ 3.94
ABCD4-202ENST00000460308 HMGXB3Q12766 1538 aa39.65■■■■□ 3.94
ABCD4-202ENST00000460308 BAZ1BQ9UIG0 1483 aaKnown RBP39.61■■■■□ 3.93
ABCD4-202ENST00000460308 WIZO95785 1651 aa39.43■■■■□ 3.9
ABCD4-202ENST00000460308 RSF1Q96T23 1441 aaPredicted RBP39.41■■■■□ 3.9
ABCD4-202ENST00000460308 TOP2AP11388 1531 aaKnown RBP38.99■■■■□ 3.83
ABCD4-202ENST00000460308 NESP48681 1621 aa38.91■■■■□ 3.82
ABCD4-202ENST00000460308 ERCC6Q03468 1493 aa38.82■■■■□ 3.81
ABCD4-202ENST00000460308 LAMC3Q9Y6N6 1575 aa38.82■■■■□ 3.8
ABCD4-202ENST00000460308 CADPSQ9ULU8 1353 aa38.75■■■■□ 3.79
ABCD4-202ENST00000460308 PDS5BQ9NTI5 1447 aa38.62■■■■□ 3.77
ABCD4-202ENST00000460308 SUPT5HO00267 1087 aaKnown RBP38.59■■■■□ 3.77
ABCD4-202ENST00000460308 CCDC88BA6NC98 1476 aa38.57■■■■□ 3.76
ABCD4-202ENST00000460308 CFTRP13569 1480 aa38.47■■■■□ 3.75
ABCD4-202ENST00000460308 KIF21AQ7Z4S6 1674 aa38.43■■■■□ 3.74
ABCD4-202ENST00000460308 CUX2O14529 1486 aa38.33■■■■□ 3.73
ABCD4-202ENST00000460308 FANCD2Q9BXW9 1451 aa38.29■■■■□ 3.72
ABCD4-202ENST00000460308 THOC2Q8NI27 1593 aaKnown RBP38.25■■■■□ 3.71
ABCD4-202ENST00000460308 CEP164Q9UPV0 1460 aa38.24■■■■□ 3.71
ABCD4-202ENST00000460308 PRDM2Q13029 1718 aa38.18■■■■□ 3.7
ABCD4-202ENST00000460308 MRC2Q9UBG0 1479 aa38.17■■■■□ 3.7
ABCD4-202ENST00000460308 WDR62O43379 1518 aa38■■■■□ 3.67
ABCD4-202ENST00000460308 URB2Q14146 1524 aaKnown RBP37.87■■■■□ 3.65
ABCD4-202ENST00000460308 ABCC8Q09428 1581 aa37.72■■■■□ 3.63
ABCD4-202ENST00000460308 TOPBP1Q92547 1522 aa37.66■■■■□ 3.62
ABCD4-202ENST00000460308 DNMBPQ6XZF7 1577 aa37.62■■■■□ 3.61
ABCD4-202ENST00000460308 IFT140Q96RY7 1462 aa37.44■■■■□ 3.58
ABCD4-202ENST00000460308 CUX1P39880 1505 aa37.37■■■■□ 3.57
ABCD4-202ENST00000460308 POLA1P09884 1462 aaPredicted RBP37.33■■■■□ 3.57
ABCD4-202ENST00000460308 FGD5Q6ZNL6 1462 aa37.27■■■■□ 3.56
ABCD4-202ENST00000460308 SOGA1O94964 1423 aa37.26■■■■□ 3.55
ABCD4-202ENST00000460308 ZNF608Q9ULD9 1512 aaPredicted RBP37.24■■■■□ 3.55
ABCD4-202ENST00000460308 TARBP1Q13395 1621 aaKnown RBP37.21■■■■□ 3.55
ABCD4-202ENST00000460308 RAD54L2Q9Y4B4 1467 aa37.2■■■■□ 3.55
ABCD4-202ENST00000460308 WRNQ14191 1432 aaPredicted RBP eCLIP37.2■■■■□ 3.55
ABCD4-202ENST00000460308 DNAJC5Q9H3Z4 198 aa37.18■■■■□ 3.54
ABCD4-202ENST00000460308 EIF4G3O43432 1585 aaKnown RBP37.08■■■■□ 3.53
ABCD4-202ENST00000460308 AQRO60306 1485 aaKnown RBP eCLIP37.07■■■■□ 3.537e-8■■■■■ 35.6
ABCD4-202ENST00000460308 TOP2BQ02880 1626 aa37.07■■■■□ 3.52
ABCD4-202ENST00000460308 SYNJ1O43426 1573 aa37.04■■■■□ 3.52
ABCD4-202ENST00000460308 BIVM-ERCC5R4GMW8 1640 aa37.04■■■■□ 3.52
ABCD4-202ENST00000460308 TDRD9Q8NDG6 1382 aaKnown RBP37.04■■■■□ 3.52
ABCD4-202ENST00000460308 WDR97A6NE52 1622 aa36.93■■■■□ 3.5
ABCD4-202ENST00000460308 ABCA10Q8WWZ4 1543 aa36.9■■■■□ 3.5
ABCD4-202ENST00000460308 OSCARQ8IYS5 282 aa36.86■■■■□ 3.49
ABCD4-202ENST00000460308 GAPVD1Q14C86 1478 aa36.81■■■■□ 3.48
ABCD4-202ENST00000460308 GRIN2BQ13224 1484 aa36.78■■■■□ 3.48
ABCD4-202ENST00000460308 FBLN2P98095 1184 aa36.75■■■■□ 3.47
ABCD4-202ENST00000460308 SNAPC4Q5SXM2 1469 aa36.71■■■■□ 3.47
ABCD4-202ENST00000460308 ABCA5Q8WWZ7 1642 aa36.7■■■■□ 3.47
ABCD4-202ENST00000460308 PBRM1Q86U86 1689 aa36.67■■■■□ 3.46
ABCD4-202ENST00000460308 MAGI1Q96QZ7 1491 aaPredicted RBP36.67■■■■□ 3.46
ABCD4-202ENST00000460308 CHMP7Q8WUX9 453 aaPredicted RBP36.63■■■■□ 3.45
ABCD4-202ENST00000460308 CHD1O14646 1710 aa36.62■■■■□ 3.45
ABCD4-202ENST00000460308 SYNJ2O15056 1496 aa36.53■■■■□ 3.44
ABCD4-202ENST00000460308 ERICH3Q5RHP9 1530 aa36.46■■■■□ 3.43
ABCD4-202ENST00000460308 TRIM41Q8WV44 630 aa36.45■■■■□ 3.43
ABCD4-202ENST00000460308 KIF27Q86VH2 1401 aa36.44■■■■□ 3.42
ABCD4-202ENST00000460308 ADAMTS12P58397 1594 aa36.37■■■■□ 3.41
ABCD4-202ENST00000460308 FHAD1B1AJZ9 1412 aa36.37■■■■□ 3.41
ABCD4-202ENST00000460308 GRIN2AQ12879 1464 aa36.29■■■■□ 3.4
ABCD4-202ENST00000460308 IGF1RP08069 1367 aa36.27■■■■□ 3.4
ABCD4-202ENST00000460308 CLASP1Q7Z460 1538 aa36.19■■■■□ 3.38
ABCD4-202ENST00000460308 ARHGEF11O15085 1522 aa36.15■■■■□ 3.38
ABCD4-202ENST00000460308 CUL7Q14999 1698 aa36.14■■■■□ 3.38
ABCD4-202ENST00000460308 RIMBP3CA6NJZ7 1639 aa36.14■■■■□ 3.38
ABCD4-202ENST00000460308 RIMBP3BA6NNM3 1639 aa36.14■■■■□ 3.38
ABCD4-202ENST00000460308 RIMBP3Q9UFD9 1639 aa36.14■■■■□ 3.38
ABCD4-202ENST00000460308 NUP160Q12769 1436 aa36.1■■■■□ 3.37
ABCD4-202ENST00000460308 CARMIL1Q5VZK9 1371 aa36.09■■■■□ 3.37
ABCD4-202ENST00000460308 CEP170Q5SW79 1584 aa36.08■■■■□ 3.37
ABCD4-202ENST00000460308 RUSC2Q8N2Y8 1516 aa36.08■■■■□ 3.37
ABCD4-202ENST00000460308 CHIC1Q5VXU3 224 aa35.97■■■■□ 3.35
ABCD4-202ENST00000460308 CYB5RLQ6IPT4 315 aa35.93■■■■□ 3.34
ABCD4-202ENST00000460308 RAPGEF2Q9Y4G8 1499 aa35.86■■■■□ 3.33
ABCD4-202ENST00000460308 JPH4Q96JJ6 628 aa35.85■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms