RNA–Protein interactions for RNA: ENST00000544944.6

CLASRP-204, Transcript of CLK4 associating serine/arginine rich protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLASRP, Length 2,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASRP-204ENST00000544944 NISCHQ9Y2I1 1504 aa30.15■■■□□ 2.42
CLASRP-204ENST00000544944 SHROOM4Q9ULL8 1493 aa26.25■■□□□ 1.79
CLASRP-204ENST00000544944 DCAF8L2P0C7V8 631 aa25.7■■□□□ 1.7
CLASRP-204ENST00000544944 SUPT5HO00267 1087 aaKnown RBP25.66■■□□□ 1.7
CLASRP-204ENST00000544944 ZCCHC6Q5VYS8 1495 aaKnown RBP25.44■■□□□ 1.66
CLASRP-204ENST00000544944 CCDC180Q9P1Z9 1646 aa25.4■■□□□ 1.66
CLASRP-204ENST00000544944 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
CLASRP-204ENST00000544944 MYO15BQ96JP2 1530 aa24.61■■□□□ 1.53
CLASRP-204ENST00000544944 DCAF1Q9Y4B6 1507 aa24.43■■□□□ 1.5
CLASRP-204ENST00000544944 SCRIBQ14160 1630 aa24.27■■□□□ 1.48
CLASRP-204ENST00000544944 ABCC9O60706 1549 aa24.21■■□□□ 1.47
CLASRP-204ENST00000544944 LOC105371045A0A1W2PR82 267 aa24.19■■□□□ 1.46
CLASRP-204ENST00000544944 PCGF6Q9BYE7 350 aa23.98■■□□□ 1.43
CLASRP-204ENST00000544944 RSF1Q96T23 1441 aaPredicted RBP23.95■■□□□ 1.42
CLASRP-204ENST00000544944 EHMT2Q96KQ7 1210 aa23.88■■□□□ 1.41
CLASRP-204ENST00000544944 HRCP23327 699 aa23.86■■□□□ 1.41
CLASRP-204ENST00000544944 FAM9AQ8IZU1 332 aaPredicted RBP23.82■■□□□ 1.4
CLASRP-204ENST00000544944 CECR2Q9BXF3 1484 aa23.79■■□□□ 1.4
CLASRP-204ENST00000544944 PPARGC1BQ86YN6 1023 aaKnown RBP23.78■■□□□ 1.4
CLASRP-204ENST00000544944 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
CLASRP-204ENST00000544944 TRIM41Q8WV44 630 aa23.69■■□□□ 1.38
CLASRP-204ENST00000544944 NACADO15069 1562 aa23.6■■□□□ 1.37
CLASRP-204ENST00000544944 MROH2BQ7Z745 1585 aa23.6■■□□□ 1.37
CLASRP-204ENST00000544944 PELP1Q8IZL8 1130 aaKnown RBP23.56■■□□□ 1.36
CLASRP-204ENST00000544944 WIZO95785 1651 aa23.48■■□□□ 1.35
CLASRP-204ENST00000544944 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.326e-7■■□□□ 14.1
CLASRP-204ENST00000544944 TRIM26Q12899 539 aaPredicted RBP23.25■■□□□ 1.31
CLASRP-204ENST00000544944 BAZ1AQ9NRL2 1556 aaPredicted RBP23.09■■□□□ 1.29
CLASRP-204ENST00000544944 SCAF1Q9H7N4 1312 aaKnown RBP23.07■■□□□ 1.28
CLASRP-204ENST00000544944 UNC13AQ9UPW8 1703 aa23.07■■□□□ 1.28
CLASRP-204ENST00000544944 ABCC8Q09428 1581 aa23.03■■□□□ 1.28
CLASRP-204ENST00000544944 TTBK1Q5TCY1 1321 aaPredicted RBP23.01■■□□□ 1.27
CLASRP-204ENST00000544944 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
CLASRP-204ENST00000544944 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
CLASRP-204ENST00000544944 TOP2AP11388 1531 aaKnown RBP22.89■■□□□ 1.25
CLASRP-204ENST00000544944 EIF4G1Q04637 1599 aaKnown RBP22.88■■□□□ 1.25
CLASRP-204ENST00000544944 SMARCA2P51531 1590 aa22.85■■□□□ 1.25
CLASRP-204ENST00000544944 BICRAQ9NZM4 1560 aa22.81■■□□□ 1.24
CLASRP-204ENST00000544944 SOGA1O94964 1423 aa22.81■■□□□ 1.24
CLASRP-204ENST00000544944 RUSC2Q8N2Y8 1516 aa22.75■■□□□ 1.23
CLASRP-204ENST00000544944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.67■■□□□ 1.22
CLASRP-204ENST00000544944 MYT1Q01538 1121 aa22.67■■□□□ 1.22
CLASRP-204ENST00000544944 UBTFP17480 764 aaKnown RBP22.66■■□□□ 1.22
CLASRP-204ENST00000544944 RANGAP1P46060 587 aaPredicted RBP22.59■■□□□ 1.21
CLASRP-204ENST00000544944 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
CLASRP-204ENST00000544944 CEP162Q5TB80 1403 aa22.53■■□□□ 1.2
CLASRP-204ENST00000544944 WRNQ14191 1432 aaPredicted RBP eCLIP22.48■■□□□ 1.19
CLASRP-204ENST00000544944 ZEB1P37275 1124 aaPredicted RBP22.48■■□□□ 1.19
CLASRP-204ENST00000544944 ATAD2BQ9ULI0 1458 aa22.48■■□□□ 1.19
CLASRP-204ENST00000544944 CCER1Q8TC90 406 aaPredicted RBP22.46■■□□□ 1.19
CLASRP-204ENST00000544944 BAZ1BQ9UIG0 1483 aaKnown RBP22.43■■□□□ 1.18
CLASRP-204ENST00000544944 SYNJ1O43426 1573 aa22.41■■□□□ 1.18
CLASRP-204ENST00000544944 TNIKQ9UKE5 1360 aa22.37■■□□□ 1.17
CLASRP-204ENST00000544944 PEG3Q9GZU2 1588 aa22.34■■□□□ 1.17
CLASRP-204ENST00000544944 GOLGA3Q08378 1498 aa22.26■■□□□ 1.15
CLASRP-204ENST00000544944 NEUROD1Q13562 356 aa22.26■■□□□ 1.15
CLASRP-204ENST00000544944 EEA1Q15075 1411 aa22.22■■□□□ 1.15
CLASRP-204ENST00000544944 GTF3C3Q9Y5Q9 886 aa22.21■■□□□ 1.15
CLASRP-204ENST00000544944 HNRNPUL2Q1KMD3 747 aaKnown RBP22.21■■□□□ 1.15
CLASRP-204ENST00000544944 ACIN1Q9UKV3 1341 aaKnown RBP22.19■■□□□ 1.14
CLASRP-204ENST00000544944 RAPGEF2Q9Y4G8 1499 aa22.18■■□□□ 1.14
CLASRP-204ENST00000544944 CLIP1P30622 1438 aa22.12■■□□□ 1.13
CLASRP-204ENST00000544944 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
CLASRP-204ENST00000544944 KIF21BO75037 1637 aa21.99■■□□□ 1.11
CLASRP-204ENST00000544944 APLP2Q06481 763 aa21.98■■□□□ 1.11
CLASRP-204ENST00000544944 TOP2BQ02880 1626 aa21.97■■□□□ 1.11
CLASRP-204ENST00000544944 NCAPD3P42695 1498 aa21.94■■□□□ 1.1
CLASRP-204ENST00000544944 CUX1P39880 1505 aa21.93■■□□□ 1.1
CLASRP-204ENST00000544944 VPS8Q8N3P4 1428 aa21.92■■□□□ 1.1
CLASRP-204ENST00000544944 DIEXFQ68CQ4 756 aaKnown RBP21.9■■□□□ 1.1
CLASRP-204ENST00000544944 KANK4Q5T7N3 995 aaPredicted RBP21.87■■□□□ 1.09
CLASRP-204ENST00000544944 HMGXB3Q12766 1538 aa21.83■■□□□ 1.08
CLASRP-204ENST00000544944 BIVM-ERCC5R4GMW8 1640 aa21.82■■□□□ 1.08
CLASRP-204ENST00000544944 CFTRP13569 1480 aa21.79■■□□□ 1.08
CLASRP-204ENST00000544944 PRXQ9BXM0 1461 aa21.78■■□□□ 1.08
CLASRP-204ENST00000544944 ITGAEP38570 1179 aa21.76■■□□□ 1.07
CLASRP-204ENST00000544944 CENPBP07199 599 aaPredicted RBP21.76■■□□□ 1.07
CLASRP-204ENST00000544944 ARAP1Q96P48 1450 aa21.75■■□□□ 1.07
CLASRP-204ENST00000544944 KIF27Q86VH2 1401 aa21.74■■□□□ 1.07
CLASRP-204ENST00000544944 P3H3Q8IVL6 736 aa21.7■■□□□ 1.07
CLASRP-204ENST00000544944 BCL11AQ9H165 835 aa21.7■■□□□ 1.06
CLASRP-204ENST00000544944 CUX2O14529 1486 aa21.68■■□□□ 1.06
CLASRP-204ENST00000544944 ZNF316A6NFI3 1004 aaPredicted RBP21.68■■□□□ 1.06
CLASRP-204ENST00000544944 YTHDC1Q96MU7 727 aaKnown RBP21.67■■□□□ 1.06
CLASRP-204ENST00000544944 CADPSQ9ULU8 1353 aa21.63■■□□□ 1.05
CLASRP-204ENST00000544944 ATP1B4Q9UN42 357 aaPredicted RBP21.63■■□□□ 1.05
CLASRP-204ENST00000544944 ERICH3Q5RHP9 1530 aa21.62■■□□□ 1.05
CLASRP-204ENST00000544944 IGF1RP08069 1367 aa21.61■■□□□ 1.05
CLASRP-204ENST00000544944 DNAJC5BQ9UF47 199 aa21.6■■□□□ 1.05
CLASRP-204ENST00000544944 CC2D2AQ9P2K1 1620 aa21.59■■□□□ 1.05
CLASRP-204ENST00000544944 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
CLASRP-204ENST00000544944 FGD5Q6ZNL6 1462 aa21.57■■□□□ 1.04
CLASRP-204ENST00000544944 NESP48681 1621 aa21.56■■□□□ 1.04
CLASRP-204ENST00000544944 MIER1Q8N108 512 aa21.54■■□□□ 1.04
CLASRP-204ENST00000544944 CARMIL1Q5VZK9 1371 aa21.52■■□□□ 1.04
CLASRP-204ENST00000544944 RAD54L2Q9Y4B4 1467 aa21.52■■□□□ 1.04
CLASRP-204ENST00000544944 FANCD2Q9BXW9 1451 aa21.47■■□□□ 1.03
CLASRP-204ENST00000544944 DHX57Q6P158 1386 aaKnown RBP21.46■■□□□ 1.03
CLASRP-204ENST00000544944 FAM50AQ14320 339 aaKnown RBP21.39■■□□□ 1.01
CLASRP-204ENST00000544944 CCNB3Q8WWL7 1395 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms