Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
NR2E3Q9Y5X4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.43■■□□□ 1.98
NR2E3Q9Y5X4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.43■■□□□ 1.98
NR2E3Q9Y5X4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC27.43■■□□□ 1.98
NR2E3Q9Y5X4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC27.43■■□□□ 1.98
NR2E3Q9Y5X4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
NR2E3Q9Y5X4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
NR2E3Q9Y5X4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
NR2E3Q9Y5X4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
NR2E3Q9Y5X4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
NR2E3Q9Y5X4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.41■■□□□ 1.98
NR2E3Q9Y5X4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
NR2E3Q9Y5X4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
NR2E3Q9Y5X4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
NR2E3Q9Y5X4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
NR2E3Q9Y5X4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
NR2E3Q9Y5X4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC27.4■■□□□ 1.98
NR2E3Q9Y5X4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
NR2E3Q9Y5X4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
NR2E3Q9Y5X4 AC005837.3-201ENST00000612163 286 ntBASIC27.39■■□□□ 1.98
NR2E3Q9Y5X4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
NR2E3Q9Y5X4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
NR2E3Q9Y5X4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
NR2E3Q9Y5X4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
NR2E3Q9Y5X4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
NR2E3Q9Y5X4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
NR2E3Q9Y5X4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.37■■□□□ 1.97
NR2E3Q9Y5X4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
NR2E3Q9Y5X4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.36■■□□□ 1.97
NR2E3Q9Y5X4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC27.36■■□□□ 1.97
NR2E3Q9Y5X4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC27.35■■□□□ 1.97
NR2E3Q9Y5X4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.35■■□□□ 1.97
NR2E3Q9Y5X4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.35■■□□□ 1.97
NR2E3Q9Y5X4 AC087393.1-201ENST00000582896 145 ntBASIC27.35■■□□□ 1.97
NR2E3Q9Y5X4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.34■■□□□ 1.97
NR2E3Q9Y5X4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
NR2E3Q9Y5X4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.34■■□□□ 1.97
NR2E3Q9Y5X4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
NR2E3Q9Y5X4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC27.33■■□□□ 1.97
NR2E3Q9Y5X4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.32■■□□□ 1.96
NR2E3Q9Y5X4 AL136116.3-201ENST00000402907 1138 ntBASIC27.32■■□□□ 1.96
NR2E3Q9Y5X4 AC131281.2-201ENST00000520478 145 ntBASIC27.32■■□□□ 1.96
NR2E3Q9Y5X4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
NR2E3Q9Y5X4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
NR2E3Q9Y5X4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.31■■□□□ 1.96
NR2E3Q9Y5X4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
NR2E3Q9Y5X4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
NR2E3Q9Y5X4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
NR2E3Q9Y5X4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.3■■□□□ 1.96
NR2E3Q9Y5X4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.3■■□□□ 1.96
NR2E3Q9Y5X4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.3■■□□□ 1.96
NR2E3Q9Y5X4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
NR2E3Q9Y5X4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
NR2E3Q9Y5X4 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.29■■□□□ 1.96
NR2E3Q9Y5X4 AC110285.6-201ENST00000617652 491 ntBASIC27.29■■□□□ 1.96
NR2E3Q9Y5X4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
NR2E3Q9Y5X4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NR2E3Q9Y5X4 ST7-AS1-201ENST00000456775 1889 ntBASIC27.28■■□□□ 1.96
NR2E3Q9Y5X4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NR2E3Q9Y5X4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
NR2E3Q9Y5X4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC27.28■■□□□ 1.96
NR2E3Q9Y5X4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC27.28■■□□□ 1.96
NR2E3Q9Y5X4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NR2E3Q9Y5X4 TSPY9P-201ENST00000440215 945 ntBASIC27.27■■□□□ 1.96
NR2E3Q9Y5X4 TSPY11P-201ENST00000442607 1045 ntBASIC27.27■■□□□ 1.96
NR2E3Q9Y5X4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.27■■□□□ 1.96
NR2E3Q9Y5X4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
NR2E3Q9Y5X4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
NR2E3Q9Y5X4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
NR2E3Q9Y5X4 RARRES2P6-201ENST00000567333 442 ntBASIC27.26■■□□□ 1.95
NR2E3Q9Y5X4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC27.26■■□□□ 1.95
NR2E3Q9Y5X4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
NR2E3Q9Y5X4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
NR2E3Q9Y5X4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.26■■□□□ 1.95
NR2E3Q9Y5X4 AC139426.1-201ENST00000568218 2529 ntBASIC27.25■■□□□ 1.95
NR2E3Q9Y5X4 AL135925.1-201ENST00000605920 1701 ntBASIC27.25■■□□□ 1.95
NR2E3Q9Y5X4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
NR2E3Q9Y5X4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC27.25■■□□□ 1.95
NR2E3Q9Y5X4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.24■■□□□ 1.95
NR2E3Q9Y5X4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
NR2E3Q9Y5X4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC27.24■■□□□ 1.95
NR2E3Q9Y5X4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
NR2E3Q9Y5X4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.24■■□□□ 1.95
NR2E3Q9Y5X4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC27.24■■□□□ 1.95
NR2E3Q9Y5X4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.24■■□□□ 1.95
NR2E3Q9Y5X4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NR2E3Q9Y5X4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NR2E3Q9Y5X4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.23■■□□□ 1.95
NR2E3Q9Y5X4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.23■■□□□ 1.95
NR2E3Q9Y5X4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
NR2E3Q9Y5X4 AC104564.3-201ENST00000582367 638 ntBASIC27.23■■□□□ 1.95
NR2E3Q9Y5X4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.22■■□□□ 1.95
NR2E3Q9Y5X4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC27.22■■□□□ 1.95
NR2E3Q9Y5X4 AC133561.4-201ENST00000566112 224 ntBASIC27.22■■□□□ 1.95
NR2E3Q9Y5X4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.22■■□□□ 1.95
NR2E3Q9Y5X4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
NR2E3Q9Y5X4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC27.21■■□□□ 1.95
NR2E3Q9Y5X4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
NR2E3Q9Y5X4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
NR2E3Q9Y5X4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms