Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
BRD9Q9H8M2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
BRD9Q9H8M2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
BRD9Q9H8M2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
BRD9Q9H8M2 DRD5P2-201ENST00000421395 2012 ntBASIC25.36■■□□□ 1.65
BRD9Q9H8M2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
BRD9Q9H8M2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
BRD9Q9H8M2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.35■■□□□ 1.65
BRD9Q9H8M2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
BRD9Q9H8M2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
BRD9Q9H8M2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
BRD9Q9H8M2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
BRD9Q9H8M2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
BRD9Q9H8M2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.34■■□□□ 1.65
BRD9Q9H8M2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.34■■□□□ 1.65
BRD9Q9H8M2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.34■■□□□ 1.65
BRD9Q9H8M2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
BRD9Q9H8M2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
BRD9Q9H8M2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
BRD9Q9H8M2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.33■■□□□ 1.65
BRD9Q9H8M2 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.33■■□□□ 1.65
BRD9Q9H8M2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.33■■□□□ 1.65
BRD9Q9H8M2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
BRD9Q9H8M2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.33■■□□□ 1.65
BRD9Q9H8M2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
BRD9Q9H8M2 WHAMMP3-201ENST00000611636 1609 ntBASIC25.33■■□□□ 1.65
BRD9Q9H8M2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.64
BRD9Q9H8M2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.32■■□□□ 1.64
BRD9Q9H8M2 GUSBP5-201ENST00000418136 578 ntBASIC25.32■■□□□ 1.64
BRD9Q9H8M2 AL031848.2-201ENST00000607670 837 ntBASIC25.32■■□□□ 1.64
BRD9Q9H8M2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
BRD9Q9H8M2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.32■■□□□ 1.64
BRD9Q9H8M2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.31■■□□□ 1.64
BRD9Q9H8M2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
BRD9Q9H8M2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.31■■□□□ 1.64
BRD9Q9H8M2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
BRD9Q9H8M2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
BRD9Q9H8M2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
BRD9Q9H8M2 AC103724.3-201ENST00000564481 992 ntBASIC25.31■■□□□ 1.64
BRD9Q9H8M2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
BRD9Q9H8M2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
BRD9Q9H8M2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
BRD9Q9H8M2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
BRD9Q9H8M2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.3■■□□□ 1.64
BRD9Q9H8M2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
BRD9Q9H8M2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
BRD9Q9H8M2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
BRD9Q9H8M2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
BRD9Q9H8M2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
BRD9Q9H8M2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.29■■□□□ 1.64
BRD9Q9H8M2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
BRD9Q9H8M2 THA1P-201ENST00000590384 1145 ntBASIC25.29■■□□□ 1.64
BRD9Q9H8M2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
BRD9Q9H8M2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
BRD9Q9H8M2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.28■■□□□ 1.64
BRD9Q9H8M2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
BRD9Q9H8M2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
BRD9Q9H8M2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.28■■□□□ 1.64
BRD9Q9H8M2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.28■■□□□ 1.64
BRD9Q9H8M2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
BRD9Q9H8M2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
BRD9Q9H8M2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
BRD9Q9H8M2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
BRD9Q9H8M2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
BRD9Q9H8M2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
BRD9Q9H8M2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.27■■□□□ 1.64
BRD9Q9H8M2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
BRD9Q9H8M2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
BRD9Q9H8M2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
BRD9Q9H8M2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
BRD9Q9H8M2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
BRD9Q9H8M2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
BRD9Q9H8M2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
BRD9Q9H8M2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.26■■□□□ 1.63
BRD9Q9H8M2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
BRD9Q9H8M2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
BRD9Q9H8M2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.25■■□□□ 1.63
BRD9Q9H8M2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
BRD9Q9H8M2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
BRD9Q9H8M2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
BRD9Q9H8M2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.24■■□□□ 1.63
BRD9Q9H8M2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
BRD9Q9H8M2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
BRD9Q9H8M2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
BRD9Q9H8M2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
BRD9Q9H8M2 AC019171.1-201ENST00000601251 1056 ntBASIC25.23■■□□□ 1.63
BRD9Q9H8M2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.23■■□□□ 1.63
BRD9Q9H8M2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
BRD9Q9H8M2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
BRD9Q9H8M2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
BRD9Q9H8M2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
BRD9Q9H8M2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.22■■□□□ 1.63
BRD9Q9H8M2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
BRD9Q9H8M2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
BRD9Q9H8M2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.21■■□□□ 1.63
BRD9Q9H8M2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.21■■□□□ 1.63
BRD9Q9H8M2 AC087393.1-201ENST00000582896 145 ntBASIC25.21■■□□□ 1.63
BRD9Q9H8M2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
BRD9Q9H8M2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
BRD9Q9H8M2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms