Protein–RNA interactions for Protein: Q9H6Z4

RANBP3, Ran-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3Q9H6Z4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RANBP3Q9H6Z4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RANBP3Q9H6Z4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RANBP3Q9H6Z4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.95■□□□□ 0.94
RANBP3Q9H6Z4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.95■□□□□ 0.94
RANBP3Q9H6Z4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.95■□□□□ 0.94
RANBP3Q9H6Z4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RANBP3Q9H6Z4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RANBP3Q9H6Z4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RANBP3Q9H6Z4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RANBP3Q9H6Z4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RANBP3Q9H6Z4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RANBP3Q9H6Z4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RANBP3Q9H6Z4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RANBP3Q9H6Z4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RANBP3Q9H6Z4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.93■□□□□ 0.94
RANBP3Q9H6Z4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RANBP3Q9H6Z4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RANBP3Q9H6Z4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RANBP3Q9H6Z4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.93■□□□□ 0.94
RANBP3Q9H6Z4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.93■□□□□ 0.94
RANBP3Q9H6Z4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RANBP3Q9H6Z4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RANBP3Q9H6Z4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RANBP3Q9H6Z4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.93■□□□□ 0.94
RANBP3Q9H6Z4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RANBP3Q9H6Z4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RANBP3Q9H6Z4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RANBP3Q9H6Z4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.92■□□□□ 0.94
RANBP3Q9H6Z4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
RANBP3Q9H6Z4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.92■□□□□ 0.94
RANBP3Q9H6Z4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RANBP3Q9H6Z4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RANBP3Q9H6Z4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RANBP3Q9H6Z4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RANBP3Q9H6Z4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RANBP3Q9H6Z4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RANBP3Q9H6Z4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RANBP3Q9H6Z4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.91■□□□□ 0.94
RANBP3Q9H6Z4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.91■□□□□ 0.94
RANBP3Q9H6Z4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
RANBP3Q9H6Z4 LINC01971-201ENST00000617888 1048 ntBASIC20.91■□□□□ 0.94
RANBP3Q9H6Z4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RANBP3Q9H6Z4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RANBP3Q9H6Z4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RANBP3Q9H6Z4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RANBP3Q9H6Z4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
RANBP3Q9H6Z4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RANBP3Q9H6Z4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RANBP3Q9H6Z4 CLDN5-201ENST00000403084 2357 ntBASIC20.89■□□□□ 0.94
RANBP3Q9H6Z4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
RANBP3Q9H6Z4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RANBP3Q9H6Z4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RANBP3Q9H6Z4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RANBP3Q9H6Z4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.89■□□□□ 0.93
RANBP3Q9H6Z4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RANBP3Q9H6Z4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RANBP3Q9H6Z4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RANBP3Q9H6Z4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.88■□□□□ 0.93
RANBP3Q9H6Z4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.88■□□□□ 0.93
RANBP3Q9H6Z4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RANBP3Q9H6Z4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
RANBP3Q9H6Z4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RANBP3Q9H6Z4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.87■□□□□ 0.93
RANBP3Q9H6Z4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.87■□□□□ 0.93
RANBP3Q9H6Z4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RANBP3Q9H6Z4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RANBP3Q9H6Z4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RANBP3Q9H6Z4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RANBP3Q9H6Z4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RANBP3Q9H6Z4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RANBP3Q9H6Z4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RANBP3Q9H6Z4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RANBP3Q9H6Z4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RANBP3Q9H6Z4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RANBP3Q9H6Z4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RANBP3Q9H6Z4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.86■□□□□ 0.93
RANBP3Q9H6Z4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RANBP3Q9H6Z4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.86■□□□□ 0.93
RANBP3Q9H6Z4 AC068473.5-201ENST00000616428 2072 ntBASIC20.85■□□□□ 0.93
RANBP3Q9H6Z4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RANBP3Q9H6Z4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.85■□□□□ 0.93
RANBP3Q9H6Z4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.85■□□□□ 0.93
RANBP3Q9H6Z4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RANBP3Q9H6Z4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RANBP3Q9H6Z4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RANBP3Q9H6Z4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RANBP3Q9H6Z4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RANBP3Q9H6Z4 AC142381.3-201ENST00000568208 1670 ntBASIC20.83■□□□□ 0.92
RANBP3Q9H6Z4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.83■□□□□ 0.92
RANBP3Q9H6Z4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RANBP3Q9H6Z4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RANBP3Q9H6Z4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.82■□□□□ 0.92
RANBP3Q9H6Z4 DUX4L11-201ENST00000611504 1267 ntBASIC20.82■□□□□ 0.92
RANBP3Q9H6Z4 DUX4L12-201ENST00000614593 1267 ntBASIC20.82■□□□□ 0.92
RANBP3Q9H6Z4 DUX4L14-201ENST00000621227 1267 ntBASIC20.82■□□□□ 0.92
RANBP3Q9H6Z4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RANBP3Q9H6Z4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RANBP3Q9H6Z4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RANBP3Q9H6Z4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms