Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.33■■□□□ 1.65
LRRC3BQ96PB8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LRRC3BQ96PB8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.32■■□□□ 1.64
LRRC3BQ96PB8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
LRRC3BQ96PB8 YBX1P4-201ENST00000392794 808 ntBASIC25.32■■□□□ 1.64
LRRC3BQ96PB8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
LRRC3BQ96PB8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.32■■□□□ 1.64
LRRC3BQ96PB8 MIR4508-201ENST00000584178 70 ntBASIC25.32■■□□□ 1.64
LRRC3BQ96PB8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LRRC3BQ96PB8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
LRRC3BQ96PB8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LRRC3BQ96PB8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LRRC3BQ96PB8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
LRRC3BQ96PB8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LRRC3BQ96PB8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LRRC3BQ96PB8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LRRC3BQ96PB8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LRRC3BQ96PB8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
LRRC3BQ96PB8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LRRC3BQ96PB8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.3■■□□□ 1.64
LRRC3BQ96PB8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LRRC3BQ96PB8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.3■■□□□ 1.64
LRRC3BQ96PB8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRRC3BQ96PB8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.29■■□□□ 1.64
LRRC3BQ96PB8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LRRC3BQ96PB8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
LRRC3BQ96PB8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.28■■□□□ 1.64
LRRC3BQ96PB8 AL449106.1-201ENST00000608517 1980 ntBASIC25.28■■□□□ 1.64
LRRC3BQ96PB8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LRRC3BQ96PB8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
LRRC3BQ96PB8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.28■■□□□ 1.64
LRRC3BQ96PB8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LRRC3BQ96PB8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LRRC3BQ96PB8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LRRC3BQ96PB8 AC103724.3-201ENST00000564481 992 ntBASIC25.27■■□□□ 1.64
LRRC3BQ96PB8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LRRC3BQ96PB8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
LRRC3BQ96PB8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
LRRC3BQ96PB8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
LRRC3BQ96PB8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
LRRC3BQ96PB8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LRRC3BQ96PB8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.25■■□□□ 1.63
LRRC3BQ96PB8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LRRC3BQ96PB8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LRRC3BQ96PB8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.25■■□□□ 1.63
LRRC3BQ96PB8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
LRRC3BQ96PB8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.24■■□□□ 1.63
LRRC3BQ96PB8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LRRC3BQ96PB8 AC087393.1-201ENST00000582896 145 ntBASIC25.24■■□□□ 1.63
LRRC3BQ96PB8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.24■■□□□ 1.63
LRRC3BQ96PB8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LRRC3BQ96PB8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.23■■□□□ 1.63
LRRC3BQ96PB8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
LRRC3BQ96PB8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
LRRC3BQ96PB8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
LRRC3BQ96PB8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LRRC3BQ96PB8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
LRRC3BQ96PB8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LRRC3BQ96PB8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
LRRC3BQ96PB8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LRRC3BQ96PB8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
LRRC3BQ96PB8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
LRRC3BQ96PB8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LRRC3BQ96PB8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
LRRC3BQ96PB8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
LRRC3BQ96PB8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
LRRC3BQ96PB8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LRRC3BQ96PB8 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.21■■□□□ 1.63
LRRC3BQ96PB8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.21■■□□□ 1.63
LRRC3BQ96PB8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LRRC3BQ96PB8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.21■■□□□ 1.63
LRRC3BQ96PB8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
LRRC3BQ96PB8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
LRRC3BQ96PB8 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.2■■□□□ 1.62
LRRC3BQ96PB8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.2■■□□□ 1.62
LRRC3BQ96PB8 AC019171.1-201ENST00000601251 1056 ntBASIC25.2■■□□□ 1.62
LRRC3BQ96PB8 LINC01003-201ENST00000564834 1764 ntBASIC25.2■■□□□ 1.62
LRRC3BQ96PB8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
LRRC3BQ96PB8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
LRRC3BQ96PB8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
LRRC3BQ96PB8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
LRRC3BQ96PB8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
LRRC3BQ96PB8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
LRRC3BQ96PB8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.18■■□□□ 1.62
LRRC3BQ96PB8 RPS2P7-201ENST00000447334 885 ntBASIC25.18■■□□□ 1.62
LRRC3BQ96PB8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LRRC3BQ96PB8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LRRC3BQ96PB8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
LRRC3BQ96PB8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LRRC3BQ96PB8 GUSBP5-201ENST00000418136 578 ntBASIC25.17■■□□□ 1.62
LRRC3BQ96PB8 AL031848.2-201ENST00000607670 837 ntBASIC25.17■■□□□ 1.62
LRRC3BQ96PB8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
LRRC3BQ96PB8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
LRRC3BQ96PB8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
LRRC3BQ96PB8 LONRF2P2-201ENST00000439212 571 ntBASIC25.16■■□□□ 1.62
LRRC3BQ96PB8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LRRC3BQ96PB8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.16■■□□□ 1.62
LRRC3BQ96PB8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
LRRC3BQ96PB8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
LRRC3BQ96PB8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms