Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HPS1Q92902 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HPS1Q92902 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HPS1Q92902 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HPS1Q92902 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HPS1Q92902 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HPS1Q92902 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HPS1Q92902 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HPS1Q92902 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HPS1Q92902 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HPS1Q92902 AC127502.1-201ENST00000399971 1502 ntBASIC21.9■■□□□ 1.1
HPS1Q92902 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.89■■□□□ 1.1
HPS1Q92902 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
HPS1Q92902 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.89■■□□□ 1.09
HPS1Q92902 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
HPS1Q92902 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HPS1Q92902 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.88■■□□□ 1.09
HPS1Q92902 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HPS1Q92902 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HPS1Q92902 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HPS1Q92902 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HPS1Q92902 LINC01003-201ENST00000564834 1764 ntBASIC21.87■■□□□ 1.09
HPS1Q92902 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HPS1Q92902 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.87■■□□□ 1.09
HPS1Q92902 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.87■■□□□ 1.09
HPS1Q92902 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HPS1Q92902 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HPS1Q92902 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HPS1Q92902 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HPS1Q92902 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HPS1Q92902 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
HPS1Q92902 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HPS1Q92902 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HPS1Q92902 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.85■■□□□ 1.09
HPS1Q92902 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HPS1Q92902 DUX4L13-201ENST00000554103 1267 ntBASIC21.85■■□□□ 1.09
HPS1Q92902 DUX4L15-201ENST00000611059 1267 ntBASIC21.85■■□□□ 1.09
HPS1Q92902 DUX4L23-201ENST00000615195 1269 ntBASIC21.85■■□□□ 1.09
HPS1Q92902 DUX4L24-201ENST00000617576 1269 ntBASIC21.85■■□□□ 1.09
HPS1Q92902 DUX4L22-201ENST00000618238 1269 ntBASIC21.85■■□□□ 1.09
HPS1Q92902 DUX4L20-201ENST00000619712 1269 ntBASIC21.85■■□□□ 1.09
HPS1Q92902 DUX4L21-201ENST00000622058 1269 ntBASIC21.85■■□□□ 1.09
HPS1Q92902 DUX4L10-201ENST00000622460 1267 ntBASIC21.85■■□□□ 1.09
HPS1Q92902 DUX4L25-201ENST00000624915 1269 ntBASIC21.85■■□□□ 1.09
HPS1Q92902 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HPS1Q92902 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.85■■□□□ 1.09
HPS1Q92902 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
HPS1Q92902 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HPS1Q92902 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
HPS1Q92902 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.84■■□□□ 1.09
HPS1Q92902 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HPS1Q92902 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.83■■□□□ 1.09
HPS1Q92902 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HPS1Q92902 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HPS1Q92902 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HPS1Q92902 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HPS1Q92902 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.83■■□□□ 1.08
HPS1Q92902 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.83■■□□□ 1.08
HPS1Q92902 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
HPS1Q92902 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HPS1Q92902 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
HPS1Q92902 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HPS1Q92902 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HPS1Q92902 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.82■■□□□ 1.08
HPS1Q92902 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.82■■□□□ 1.08
HPS1Q92902 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.82■■□□□ 1.08
HPS1Q92902 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
HPS1Q92902 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HPS1Q92902 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HPS1Q92902 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
HPS1Q92902 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HPS1Q92902 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HPS1Q92902 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.81■■□□□ 1.08
HPS1Q92902 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
HPS1Q92902 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HPS1Q92902 LINC00273-201ENST00000539813 1452 ntBASIC21.81■■□□□ 1.08
HPS1Q92902 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HPS1Q92902 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HPS1Q92902 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HPS1Q92902 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
HPS1Q92902 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HPS1Q92902 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HPS1Q92902 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.79■■□□□ 1.08
HPS1Q92902 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HPS1Q92902 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HPS1Q92902 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HPS1Q92902 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HPS1Q92902 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPS1Q92902 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.78■■□□□ 1.08
HPS1Q92902 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
HPS1Q92902 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPS1Q92902 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HPS1Q92902 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
HPS1Q92902 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.77■■□□□ 1.08
HPS1Q92902 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HPS1Q92902 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.77■■□□□ 1.08
HPS1Q92902 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
HPS1Q92902 AP004833.2-201ENST00000532228 1454 ntBASIC21.77■■□□□ 1.07
HPS1Q92902 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
HPS1Q92902 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms