Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC38.02■■■■□ 3.68
CCNB3Q8WWL7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC38.01■■■■□ 3.68
CCNB3Q8WWL7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC38.01■■■■□ 3.68
CCNB3Q8WWL7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC38.01■■■■□ 3.68
CCNB3Q8WWL7 AC139795.1-202ENST00000500444 432 ntBASIC38.01■■■■□ 3.68
CCNB3Q8WWL7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC38.01■■■■□ 3.68
CCNB3Q8WWL7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC38.01■■■■□ 3.67
CCNB3Q8WWL7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC38.01■■■■□ 3.67
CCNB3Q8WWL7 KRT8P33-201ENST00000508125 1423 ntBASIC38■■■■□ 3.67
CCNB3Q8WWL7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
CCNB3Q8WWL7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC37.99■■■■□ 3.67
CCNB3Q8WWL7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
CCNB3Q8WWL7 PVT1_1.1-201ENST00000615125 194 ntBASIC37.98■■■■□ 3.67
CCNB3Q8WWL7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC37.97■■■■□ 3.67
CCNB3Q8WWL7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
CCNB3Q8WWL7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC37.97■■■■□ 3.67
CCNB3Q8WWL7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC37.97■■■■□ 3.67
CCNB3Q8WWL7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC37.97■■■■□ 3.67
CCNB3Q8WWL7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
CCNB3Q8WWL7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC37.96■■■■□ 3.67
CCNB3Q8WWL7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC37.96■■■■□ 3.67
CCNB3Q8WWL7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC37.95■■■■□ 3.67
CCNB3Q8WWL7 AC103834.1-201ENST00000520383 144 ntBASIC37.95■■■■□ 3.67
CCNB3Q8WWL7 AC018755.3-202ENST00000596210 929 ntBASIC37.95■■■■□ 3.67
CCNB3Q8WWL7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC37.95■■■■□ 3.67
CCNB3Q8WWL7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC37.94■■■■□ 3.66
CCNB3Q8WWL7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC37.94■■■■□ 3.66
CCNB3Q8WWL7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
CCNB3Q8WWL7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC37.93■■■■□ 3.66
CCNB3Q8WWL7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC37.93■■■■□ 3.66
CCNB3Q8WWL7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC37.93■■■■□ 3.66
CCNB3Q8WWL7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC37.93■■■■□ 3.66
CCNB3Q8WWL7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC37.92■■■■□ 3.66
CCNB3Q8WWL7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC37.92■■■■□ 3.66
CCNB3Q8WWL7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
CCNB3Q8WWL7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC37.92■■■■□ 3.66
CCNB3Q8WWL7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
CCNB3Q8WWL7 HYI-210ENST00000486909 905 ntTSL 5 BASIC37.92■■■■□ 3.66
CCNB3Q8WWL7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC37.91■■■■□ 3.66
CCNB3Q8WWL7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC37.91■■■■□ 3.66
CCNB3Q8WWL7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC37.91■■■■□ 3.66
CCNB3Q8WWL7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC37.91■■■■□ 3.66
CCNB3Q8WWL7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC37.91■■■■□ 3.66
CCNB3Q8WWL7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC37.9■■■■□ 3.66
CCNB3Q8WWL7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
CCNB3Q8WWL7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
CCNB3Q8WWL7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC37.89■■■■□ 3.66
CCNB3Q8WWL7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC37.89■■■■□ 3.66
CCNB3Q8WWL7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC37.89■■■■□ 3.66
CCNB3Q8WWL7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC37.88■■■■□ 3.65
CCNB3Q8WWL7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC37.88■■■■□ 3.65
CCNB3Q8WWL7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC37.87■■■■□ 3.65
CCNB3Q8WWL7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC37.86■■■■□ 3.65
CCNB3Q8WWL7 AC009299.2-201ENST00000482477 511 ntBASIC37.86■■■■□ 3.65
CCNB3Q8WWL7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC37.86■■■■□ 3.65
CCNB3Q8WWL7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC37.86■■■■□ 3.65
CCNB3Q8WWL7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC37.85■■■■□ 3.65
CCNB3Q8WWL7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC37.85■■■■□ 3.65
CCNB3Q8WWL7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
CCNB3Q8WWL7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC37.85■■■■□ 3.65
CCNB3Q8WWL7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC37.85■■■■□ 3.65
CCNB3Q8WWL7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
CCNB3Q8WWL7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC37.85■■■■□ 3.65
CCNB3Q8WWL7 AL449106.1-201ENST00000608517 1980 ntBASIC37.84■■■■□ 3.65
CCNB3Q8WWL7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
CCNB3Q8WWL7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC37.83■■■■□ 3.65
CCNB3Q8WWL7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC37.83■■■■□ 3.65
CCNB3Q8WWL7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC37.82■■■■□ 3.65
CCNB3Q8WWL7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC37.82■■■■□ 3.65
CCNB3Q8WWL7 MIR4508-201ENST00000584178 70 ntBASIC37.82■■■■□ 3.65
CCNB3Q8WWL7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC37.82■■■■□ 3.64
CCNB3Q8WWL7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC37.82■■■■□ 3.64
CCNB3Q8WWL7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.64
CCNB3Q8WWL7 YBX1P4-201ENST00000392794 808 ntBASIC37.81■■■■□ 3.64
CCNB3Q8WWL7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
CCNB3Q8WWL7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
CCNB3Q8WWL7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC37.8■■■■□ 3.64
CCNB3Q8WWL7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC37.8■■■■□ 3.64
CCNB3Q8WWL7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
CCNB3Q8WWL7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
CCNB3Q8WWL7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC37.79■■■■□ 3.64
CCNB3Q8WWL7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC37.79■■■■□ 3.64
CCNB3Q8WWL7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
CCNB3Q8WWL7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
CCNB3Q8WWL7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC37.78■■■■□ 3.64
CCNB3Q8WWL7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
CCNB3Q8WWL7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
CCNB3Q8WWL7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC37.78■■■■□ 3.64
CCNB3Q8WWL7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
CCNB3Q8WWL7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC37.77■■■■□ 3.64
CCNB3Q8WWL7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
CCNB3Q8WWL7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC37.76■■■■□ 3.64
CCNB3Q8WWL7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC37.76■■■■□ 3.64
CCNB3Q8WWL7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC37.76■■■■□ 3.63
CCNB3Q8WWL7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
CCNB3Q8WWL7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
CCNB3Q8WWL7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
CCNB3Q8WWL7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
CCNB3Q8WWL7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC37.74■■■■□ 3.63
CCNB3Q8WWL7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms