Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.82■■□□□ 1.24
CHD6Q8TD26 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHD6Q8TD26 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.81■■□□□ 1.24
CHD6Q8TD26 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHD6Q8TD26 AC127502.1-201ENST00000399971 1502 ntBASIC22.81■■□□□ 1.24
CHD6Q8TD26 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.81■■□□□ 1.24
CHD6Q8TD26 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.81■■□□□ 1.24
CHD6Q8TD26 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
CHD6Q8TD26 AC022616.5-201ENST00000518796 181 ntBASIC22.81■■□□□ 1.24
CHD6Q8TD26 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHD6Q8TD26 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD6Q8TD26 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD6Q8TD26 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD6Q8TD26 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.8■■□□□ 1.24
CHD6Q8TD26 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
CHD6Q8TD26 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHD6Q8TD26 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC22.78■■□□□ 1.24
CHD6Q8TD26 AC021242.3-201ENST00000607598 1377 ntBASIC22.78■■□□□ 1.24
CHD6Q8TD26 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHD6Q8TD26 AC105265.2-201ENST00000467189 838 ntBASIC22.78■■□□□ 1.24
CHD6Q8TD26 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHD6Q8TD26 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.78■■□□□ 1.24
CHD6Q8TD26 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.77■■□□□ 1.24
CHD6Q8TD26 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.77■■□□□ 1.24
CHD6Q8TD26 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHD6Q8TD26 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.77■■□□□ 1.24
CHD6Q8TD26 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.77■■□□□ 1.24
CHD6Q8TD26 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CHD6Q8TD26 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
CHD6Q8TD26 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CHD6Q8TD26 MIR3960-201ENST00000583311 91 ntBASIC22.76■■□□□ 1.23
CHD6Q8TD26 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CHD6Q8TD26 AC087393.1-201ENST00000582896 145 ntBASIC22.76■■□□□ 1.23
CHD6Q8TD26 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CHD6Q8TD26 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.75■■□□□ 1.23
CHD6Q8TD26 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CHD6Q8TD26 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CHD6Q8TD26 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.75■■□□□ 1.23
CHD6Q8TD26 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.74■■□□□ 1.23
CHD6Q8TD26 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.74■■□□□ 1.23
CHD6Q8TD26 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CHD6Q8TD26 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
CHD6Q8TD26 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.73■■□□□ 1.23
CHD6Q8TD26 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHD6Q8TD26 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHD6Q8TD26 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.73■■□□□ 1.23
CHD6Q8TD26 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.73■■□□□ 1.23
CHD6Q8TD26 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
CHD6Q8TD26 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHD6Q8TD26 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CHD6Q8TD26 AC137630.3-201ENST00000607245 391 ntBASIC22.73■■□□□ 1.23
CHD6Q8TD26 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CHD6Q8TD26 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
CHD6Q8TD26 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
CHD6Q8TD26 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.72■■□□□ 1.23
CHD6Q8TD26 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD6Q8TD26 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CHD6Q8TD26 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHD6Q8TD26 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.7■■□□□ 1.22
CHD6Q8TD26 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CHD6Q8TD26 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.7■■□□□ 1.22
CHD6Q8TD26 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHD6Q8TD26 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHD6Q8TD26 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
CHD6Q8TD26 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHD6Q8TD26 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CHD6Q8TD26 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
CHD6Q8TD26 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.7■■□□□ 1.22
CHD6Q8TD26 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.69■■□□□ 1.22
CHD6Q8TD26 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHD6Q8TD26 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.69■■□□□ 1.22
CHD6Q8TD26 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.69■■□□□ 1.22
CHD6Q8TD26 AL356740.2-201ENST00000601559 647 ntBASIC22.69■■□□□ 1.22
CHD6Q8TD26 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHD6Q8TD26 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
CHD6Q8TD26 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD6Q8TD26 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CHD6Q8TD26 AL355001.2-201ENST00000620617 1191 ntBASIC22.68■■□□□ 1.22
CHD6Q8TD26 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.67■■□□□ 1.22
CHD6Q8TD26 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CHD6Q8TD26 EDA-201ENST00000338901 1233 ntBASIC22.67■■□□□ 1.22
CHD6Q8TD26 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD6Q8TD26 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD6Q8TD26 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CHD6Q8TD26 MIR6724-1-201ENST00000616420 92 ntBASIC22.67■■□□□ 1.22
CHD6Q8TD26 MIR6724-2-201ENST00000616483 92 ntBASIC22.67■■□□□ 1.22
CHD6Q8TD26 MIR6724-4-201ENST00000617390 92 ntBASIC22.67■■□□□ 1.22
CHD6Q8TD26 MIR6724-3-201ENST00000622482 92 ntBASIC22.67■■□□□ 1.22
CHD6Q8TD26 AC066615.1-201ENST00000640911 628 ntBASIC22.67■■□□□ 1.22
CHD6Q8TD26 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.66■■□□□ 1.22
CHD6Q8TD26 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD6Q8TD26 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHD6Q8TD26 KRT18P24-201ENST00000344739 1156 ntBASIC22.66■■□□□ 1.22
CHD6Q8TD26 RPS2P7-201ENST00000447334 885 ntBASIC22.66■■□□□ 1.22
CHD6Q8TD26 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD6Q8TD26 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.66■■□□□ 1.22
CHD6Q8TD26 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.66■■□□□ 1.22
CHD6Q8TD26 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.65■■□□□ 1.22
CHD6Q8TD26 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CHD6Q8TD26 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms