Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LSMEM1Q8N8F7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LSMEM1Q8N8F7 AL359504.2-201ENST00000605506 1601 ntBASIC22.29■■□□□ 1.16
LSMEM1Q8N8F7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LSMEM1Q8N8F7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.29■■□□□ 1.16
LSMEM1Q8N8F7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
LSMEM1Q8N8F7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LSMEM1Q8N8F7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.29■■□□□ 1.16
LSMEM1Q8N8F7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.29■■□□□ 1.16
LSMEM1Q8N8F7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LSMEM1Q8N8F7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
LSMEM1Q8N8F7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
LSMEM1Q8N8F7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
LSMEM1Q8N8F7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.28■■□□□ 1.16
LSMEM1Q8N8F7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
LSMEM1Q8N8F7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LSMEM1Q8N8F7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.28■■□□□ 1.16
LSMEM1Q8N8F7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
LSMEM1Q8N8F7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LSMEM1Q8N8F7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.28■■□□□ 1.16
LSMEM1Q8N8F7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.28■■□□□ 1.16
LSMEM1Q8N8F7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LSMEM1Q8N8F7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LSMEM1Q8N8F7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
LSMEM1Q8N8F7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
LSMEM1Q8N8F7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LSMEM1Q8N8F7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LSMEM1Q8N8F7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LSMEM1Q8N8F7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LSMEM1Q8N8F7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LSMEM1Q8N8F7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.25■■□□□ 1.15
LSMEM1Q8N8F7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LSMEM1Q8N8F7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LSMEM1Q8N8F7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LSMEM1Q8N8F7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LSMEM1Q8N8F7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LSMEM1Q8N8F7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LSMEM1Q8N8F7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LSMEM1Q8N8F7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
LSMEM1Q8N8F7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.23■■□□□ 1.15
LSMEM1Q8N8F7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LSMEM1Q8N8F7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.23■■□□□ 1.15
LSMEM1Q8N8F7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LSMEM1Q8N8F7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LSMEM1Q8N8F7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LSMEM1Q8N8F7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LSMEM1Q8N8F7 AC010501.1-201ENST00000606270 1962 ntBASIC22.22■■□□□ 1.15
LSMEM1Q8N8F7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LSMEM1Q8N8F7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LSMEM1Q8N8F7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.22■■□□□ 1.15
LSMEM1Q8N8F7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LSMEM1Q8N8F7 MIR639-201ENST00000384974 98 ntBASIC22.21■■□□□ 1.15
LSMEM1Q8N8F7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
LSMEM1Q8N8F7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.21■■□□□ 1.15
LSMEM1Q8N8F7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
LSMEM1Q8N8F7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
LSMEM1Q8N8F7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LSMEM1Q8N8F7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
LSMEM1Q8N8F7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.2■■□□□ 1.14
LSMEM1Q8N8F7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.2■■□□□ 1.14
LSMEM1Q8N8F7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LSMEM1Q8N8F7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.2■■□□□ 1.14
LSMEM1Q8N8F7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
LSMEM1Q8N8F7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LSMEM1Q8N8F7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LSMEM1Q8N8F7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.19■■□□□ 1.14
LSMEM1Q8N8F7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
LSMEM1Q8N8F7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.19■■□□□ 1.14
LSMEM1Q8N8F7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LSMEM1Q8N8F7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
LSMEM1Q8N8F7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
LSMEM1Q8N8F7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LSMEM1Q8N8F7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.18■■□□□ 1.14
LSMEM1Q8N8F7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
LSMEM1Q8N8F7 ERN1-208ENST00000606895 2068 ntBASIC22.18■■□□□ 1.14
LSMEM1Q8N8F7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
LSMEM1Q8N8F7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
LSMEM1Q8N8F7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
LSMEM1Q8N8F7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
LSMEM1Q8N8F7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LSMEM1Q8N8F7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.17■■□□□ 1.14
LSMEM1Q8N8F7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
LSMEM1Q8N8F7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LSMEM1Q8N8F7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LSMEM1Q8N8F7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LSMEM1Q8N8F7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LSMEM1Q8N8F7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LSMEM1Q8N8F7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LSMEM1Q8N8F7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.17■■□□□ 1.14
LSMEM1Q8N8F7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LSMEM1Q8N8F7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LSMEM1Q8N8F7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LSMEM1Q8N8F7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LSMEM1Q8N8F7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LSMEM1Q8N8F7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LSMEM1Q8N8F7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LSMEM1Q8N8F7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LSMEM1Q8N8F7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LSMEM1Q8N8F7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.16■■□□□ 1.14
LSMEM1Q8N8F7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms