Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SIX5Q8N196 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SIX5Q8N196 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SIX5Q8N196 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
SIX5Q8N196 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
SIX5Q8N196 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SIX5Q8N196 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
SIX5Q8N196 MIR4787-201ENST00000607364 84 ntBASIC25.13■■□□□ 1.61
SIX5Q8N196 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SIX5Q8N196 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SIX5Q8N196 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.12■■□□□ 1.61
SIX5Q8N196 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
SIX5Q8N196 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
SIX5Q8N196 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
SIX5Q8N196 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SIX5Q8N196 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
SIX5Q8N196 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
SIX5Q8N196 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.11■■□□□ 1.61
SIX5Q8N196 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.11■■□□□ 1.61
SIX5Q8N196 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.11■■□□□ 1.61
SIX5Q8N196 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.1■■□□□ 1.61
SIX5Q8N196 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
SIX5Q8N196 MIR638-201ENST00000385237 100 ntBASIC25.1■■□□□ 1.61
SIX5Q8N196 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.1■■□□□ 1.61
SIX5Q8N196 LONRF2P2-201ENST00000439212 571 ntBASIC25.1■■□□□ 1.61
SIX5Q8N196 RPS2P7-201ENST00000447334 885 ntBASIC25.1■■□□□ 1.61
SIX5Q8N196 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SIX5Q8N196 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SIX5Q8N196 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SIX5Q8N196 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SIX5Q8N196 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SIX5Q8N196 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
SIX5Q8N196 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SIX5Q8N196 BX664725.1-201ENST00000438252 379 ntBASIC25.09■■□□□ 1.61
SIX5Q8N196 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.09■■□□□ 1.61
SIX5Q8N196 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.09■■□□□ 1.61
SIX5Q8N196 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
SIX5Q8N196 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
SIX5Q8N196 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SIX5Q8N196 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SIX5Q8N196 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SIX5Q8N196 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SIX5Q8N196 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SIX5Q8N196 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SIX5Q8N196 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SIX5Q8N196 KRT16P3-201ENST00000439127 1283 ntBASIC25.08■■□□□ 1.61
SIX5Q8N196 UNC93B8-201ENST00000511903 705 ntBASIC25.08■■□□□ 1.61
SIX5Q8N196 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SIX5Q8N196 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.08■■□□□ 1.6
SIX5Q8N196 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
SIX5Q8N196 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SIX5Q8N196 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
SIX5Q8N196 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SIX5Q8N196 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.07■■□□□ 1.6
SIX5Q8N196 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.07■■□□□ 1.6
SIX5Q8N196 AP002414.2-202ENST00000590929 1450 ntBASIC25.07■■□□□ 1.6
SIX5Q8N196 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.06■■□□□ 1.6
SIX5Q8N196 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SIX5Q8N196 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.06■■□□□ 1.6
SIX5Q8N196 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.06■■□□□ 1.6
SIX5Q8N196 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SIX5Q8N196 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
SIX5Q8N196 ABCB10P3-201ENST00000561950 2166 ntBASIC25.05■■□□□ 1.6
SIX5Q8N196 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.05■■□□□ 1.6
SIX5Q8N196 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.05■■□□□ 1.6
SIX5Q8N196 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SIX5Q8N196 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SIX5Q8N196 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
SIX5Q8N196 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SIX5Q8N196 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SIX5Q8N196 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SIX5Q8N196 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SIX5Q8N196 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SIX5Q8N196 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SIX5Q8N196 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SIX5Q8N196 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SIX5Q8N196 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25■■□□□ 1.59
SIX5Q8N196 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SIX5Q8N196 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25■■□□□ 1.59
SIX5Q8N196 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
SIX5Q8N196 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SIX5Q8N196 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
SIX5Q8N196 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.99■■□□□ 1.59
SIX5Q8N196 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.99■■□□□ 1.59
SIX5Q8N196 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SIX5Q8N196 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.99■■□□□ 1.59
SIX5Q8N196 AL139246.5-201ENST00000606645 996 ntBASIC24.99■■□□□ 1.59
SIX5Q8N196 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.99■■□□□ 1.59
SIX5Q8N196 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
SIX5Q8N196 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SIX5Q8N196 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SIX5Q8N196 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SIX5Q8N196 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
SIX5Q8N196 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.98■■□□□ 1.59
SIX5Q8N196 TSPY9P-201ENST00000440215 945 ntBASIC24.98■■□□□ 1.59
SIX5Q8N196 TSPY11P-201ENST00000442607 1045 ntBASIC24.98■■□□□ 1.59
SIX5Q8N196 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SIX5Q8N196 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SIX5Q8N196 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SIX5Q8N196 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms