Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SCUBE1Q8IWY4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.89■■□□□ 1.41
SCUBE1Q8IWY4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCUBE1Q8IWY4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCUBE1Q8IWY4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.88■■□□□ 1.41
SCUBE1Q8IWY4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.88■■□□□ 1.41
SCUBE1Q8IWY4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCUBE1Q8IWY4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SCUBE1Q8IWY4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SCUBE1Q8IWY4 ERN1-208ENST00000606895 2068 ntBASIC23.87■■□□□ 1.41
SCUBE1Q8IWY4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.87■■□□□ 1.41
SCUBE1Q8IWY4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCUBE1Q8IWY4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 MIR639-201ENST00000384974 98 ntBASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 HLA-V-202ENST00000446817 847 ntBASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
SCUBE1Q8IWY4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCUBE1Q8IWY4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCUBE1Q8IWY4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCUBE1Q8IWY4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
SCUBE1Q8IWY4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCUBE1Q8IWY4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
SCUBE1Q8IWY4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.85■■□□□ 1.41
SCUBE1Q8IWY4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.84■■□□□ 1.41
SCUBE1Q8IWY4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.84■■□□□ 1.41
SCUBE1Q8IWY4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.84■■□□□ 1.41
SCUBE1Q8IWY4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
SCUBE1Q8IWY4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCUBE1Q8IWY4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCUBE1Q8IWY4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.83■■□□□ 1.41
SCUBE1Q8IWY4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCUBE1Q8IWY4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCUBE1Q8IWY4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCUBE1Q8IWY4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.82■■□□□ 1.4
SCUBE1Q8IWY4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCUBE1Q8IWY4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
SCUBE1Q8IWY4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCUBE1Q8IWY4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCUBE1Q8IWY4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCUBE1Q8IWY4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCUBE1Q8IWY4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCUBE1Q8IWY4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCUBE1Q8IWY4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCUBE1Q8IWY4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCUBE1Q8IWY4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCUBE1Q8IWY4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCUBE1Q8IWY4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.8■■□□□ 1.4
SCUBE1Q8IWY4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.8■■□□□ 1.4
SCUBE1Q8IWY4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCUBE1Q8IWY4 AP004609.3-201ENST00000610705 1884 ntBASIC23.79■■□□□ 1.4
SCUBE1Q8IWY4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SCUBE1Q8IWY4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCUBE1Q8IWY4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCUBE1Q8IWY4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCUBE1Q8IWY4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCUBE1Q8IWY4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCUBE1Q8IWY4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCUBE1Q8IWY4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.78■■□□□ 1.4
SCUBE1Q8IWY4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCUBE1Q8IWY4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCUBE1Q8IWY4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SCUBE1Q8IWY4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SCUBE1Q8IWY4 AC008813.1-201ENST00000536597 885 ntBASIC23.78■■□□□ 1.4
SCUBE1Q8IWY4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCUBE1Q8IWY4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCUBE1Q8IWY4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCUBE1Q8IWY4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCUBE1Q8IWY4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCUBE1Q8IWY4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCUBE1Q8IWY4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCUBE1Q8IWY4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SCUBE1Q8IWY4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCUBE1Q8IWY4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCUBE1Q8IWY4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCUBE1Q8IWY4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCUBE1Q8IWY4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
SCUBE1Q8IWY4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
SCUBE1Q8IWY4 MIR4449-201ENST00000578365 66 ntBASIC23.74■■□□□ 1.39
SCUBE1Q8IWY4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SCUBE1Q8IWY4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.74■■□□□ 1.39
SCUBE1Q8IWY4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCUBE1Q8IWY4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SCUBE1Q8IWY4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.73■■□□□ 1.39
SCUBE1Q8IWY4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.73■■□□□ 1.39
SCUBE1Q8IWY4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCUBE1Q8IWY4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms