Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.85■□□□□ 0.93
EFNB3Q15768 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EFNB3Q15768 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EFNB3Q15768 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
EFNB3Q15768 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
EFNB3Q15768 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
EFNB3Q15768 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EFNB3Q15768 SPCS2P3-201ENST00000500401 656 ntBASIC20.84■□□□□ 0.93
EFNB3Q15768 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
EFNB3Q15768 AC018755.3-202ENST00000596210 929 ntBASIC20.84■□□□□ 0.93
EFNB3Q15768 MIR6765-201ENST00000614092 87 ntBASIC20.84■□□□□ 0.93
EFNB3Q15768 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EFNB3Q15768 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.84■□□□□ 0.93
EFNB3Q15768 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.84■□□□□ 0.93
EFNB3Q15768 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EFNB3Q15768 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EFNB3Q15768 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.84■□□□□ 0.93
EFNB3Q15768 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EFNB3Q15768 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
EFNB3Q15768 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EFNB3Q15768 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
EFNB3Q15768 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.83■□□□□ 0.92
EFNB3Q15768 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
EFNB3Q15768 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
EFNB3Q15768 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
EFNB3Q15768 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
EFNB3Q15768 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
EFNB3Q15768 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.82■□□□□ 0.92
EFNB3Q15768 AC142472.1-201ENST00000612013 1741 ntBASIC20.81■□□□□ 0.92
EFNB3Q15768 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
EFNB3Q15768 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EFNB3Q15768 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.81■□□□□ 0.92
EFNB3Q15768 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.81■□□□□ 0.92
EFNB3Q15768 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
EFNB3Q15768 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.81■□□□□ 0.92
EFNB3Q15768 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EFNB3Q15768 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
EFNB3Q15768 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EFNB3Q15768 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EFNB3Q15768 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
EFNB3Q15768 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.8■□□□□ 0.92
EFNB3Q15768 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
EFNB3Q15768 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EFNB3Q15768 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EFNB3Q15768 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.79■□□□□ 0.92
EFNB3Q15768 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.79■□□□□ 0.92
EFNB3Q15768 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
EFNB3Q15768 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
EFNB3Q15768 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EFNB3Q15768 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
EFNB3Q15768 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.78■□□□□ 0.92
EFNB3Q15768 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.78■□□□□ 0.92
EFNB3Q15768 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
EFNB3Q15768 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.78■□□□□ 0.92
EFNB3Q15768 AC074183.2-201ENST00000623112 922 ntBASIC20.78■□□□□ 0.92
EFNB3Q15768 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
EFNB3Q15768 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.77■□□□□ 0.92
EFNB3Q15768 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EFNB3Q15768 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.77■□□□□ 0.92
EFNB3Q15768 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
EFNB3Q15768 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EFNB3Q15768 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
EFNB3Q15768 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EFNB3Q15768 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFNB3Q15768 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFNB3Q15768 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFNB3Q15768 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EFNB3Q15768 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
EFNB3Q15768 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EFNB3Q15768 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFNB3Q15768 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EFNB3Q15768 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
EFNB3Q15768 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.75■□□□□ 0.91
EFNB3Q15768 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.75■□□□□ 0.91
EFNB3Q15768 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
EFNB3Q15768 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EFNB3Q15768 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EFNB3Q15768 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.74■□□□□ 0.91
EFNB3Q15768 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EFNB3Q15768 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EFNB3Q15768 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EFNB3Q15768 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EFNB3Q15768 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
EFNB3Q15768 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.73■□□□□ 0.91
EFNB3Q15768 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.73■□□□□ 0.91
EFNB3Q15768 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EFNB3Q15768 AC139795.1-202ENST00000500444 432 ntBASIC20.73■□□□□ 0.91
EFNB3Q15768 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.73■□□□□ 0.91
EFNB3Q15768 BHLHE23-202ENST00000612929 1109 ntBASIC20.73■□□□□ 0.91
EFNB3Q15768 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.73■□□□□ 0.91
EFNB3Q15768 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
EFNB3Q15768 AP004609.3-201ENST00000610705 1884 ntBASIC20.72■□□□□ 0.91
EFNB3Q15768 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.72■□□□□ 0.91
EFNB3Q15768 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EFNB3Q15768 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EFNB3Q15768 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EFNB3Q15768 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EFNB3Q15768 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
EFNB3Q15768 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFNB3Q15768 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms